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Protein domains

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CDD

Conserved Domain Database models.
Gene3D

CATH/Gene3D families.
HAMAP

HAMAP families.
NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
PANTHER

PANTHER families.
PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.
PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.
PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.
Pfam

Protein domains and motifs from the Pfam database.
Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.
SFLD

Structure-Function Linkage Database families.
SMART

Protein domains and motifs from the SMART database.
Superfamily

Protein domains and motifs from the SUPERFAMILY database.

Protein features

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AFDB-ENSP mappings

Protein features that represent the mapping between Ensembl proteins (ENSP) and AlphaFoldDB protein structures (including their corresponding chains). Imported via UniProt mappings
Cleavage site (Signalp)

Signal peptide cleavage sites predicted by SignalP.
Coiled-coils (Ncoils)

Coiled-coil regions predicted by Ncoils.
MobiDB lite

Intrinsically disordered regions predicted by MobiDB lite.
Transmembrane helices

Transmembrane helices predicted by TMHMM.

Information and decorations

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External data
User-added track

Please note that the content of external tracks is not the responsibility of the WormBase ParaSite project.