Mesorhabditis belari

Genome Assembly & Annotation

Assembly

WormBase obtained the assembly from INSDC records.

Annotation

The annotation was sent to WormBase in May 2019 by Marie Delattre.

Downloads

• Genomic Sequence (FASTA)
• Hard-masked Genomic Sequence (FASTA)
• Soft-masked Genomic Sequence (FASTA)
• Annotations (GFF3)
• Proteins (FASTA)
• Full-length transcripts (FASTA)
• CDS transcripts (FASTA)

Tools

• Search for sequences in the genome and proteome using BLAST
• Work with lists of data using the WormBase ParaSite BioMart data-mining tool
• Programatically access WormBase ParaSite data using the REST API
• Predict the effects of variants using the Variant Effect Predictor

Key Publications

• Grosmaire M, Launay C, Siegwald M, Brugière T, Estrada-Virrueta L, Berger D, Burny C, Modolo L, Blaxter M, Meister P, Félix MA, Gouyon PH, Delattre M. Males as somatic investment in a parthenogenetic nematode. Science, 2019;363(6432):1210-1213

Navigation

Genome Browser (JBrowse)

Genome Browser (Ensembl)

Example gene page

Example gene tree