WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18

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    Sequence and assembly

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    • Contigs
      Track showing underlying assembly contigs.
    • Sequence
      Track showing sequence in both directions. Only displayed at 1Kb and below.

    Genes and transcripts

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    • Protein coding genes
      Protein-coding model imported from WormBase
    • Pseudogenes
      WormBase curated pseudogene

    ncRNA

      RNA-Seq Alignments

      Enable/disable all ERP004953
      Developmental stage-specific expression in Pristionchus pacificus
        Enable/disable all ERP009764
        Microevolution of duplications and deletions and their impact on gene expression in the nematode Pristionchus pacificus
          Enable/disable all ERP022675
          Genotyping of recombinant inbred lines of the nematode Pristionchus pacificus by RNA-seq
            Enable/disable all ERP023175
            Phylotranscriptomic analysis of the nematode genus Pristionchus
              Enable/disable all ERP106416
              Young genes have distinct gene structure, epigenetic profiles, and transcription start site regulation
                Enable/disable all ERP109435
                Transcriptome variation across multiple isolates of the nematode P. pacificus
                  Enable/disable all ERP116199
                  Diet-dependent surplus killing in nematodes
                    Enable/disable all ERP117543
                    Transcriptomes of wild type, nhr-40 and nhr-1 mutants of Pristionchus pacificus
                      Enable/disable all ERP120753
                      Tomo-seq of Pristionchus pacificus nematodes
                        Enable/disable all ERP124953
                        Genome-wide relatedness shapes predatory behavior of Pristionchus pacificus
                          Enable/disable all ERP126500
                          High-resolution single worm transcriptomics in Pritionchus pacificus

                            SRP014878

                              SRP016022

                                Enable/disable all SRP034667
                                Male and Female DNA and RNA sequencing in several nematode species
                                  Enable/disable all SRP039388
                                  Pristionchus pacificus trans-spliced transcriptome and operons
                                    Enable/disable all SRP061928
                                    Pristionchus pacificus intestinal transcriptome
                                      Enable/disable all SRP081198
                                      Life history responses and gene expression profiles of the nematode Pristionchus pacificus cultured on Cryptococcus yeasts
                                        Enable/disable all SRP117954
                                        Evolution of piRNAs in nematodes
                                          Enable/disable all SRP215500
                                          Multiple plasticity regulators reveal targets specifying an induced predatory form in nematodes

                                            SRP278175

                                                Pairwise whole genome alignments

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                                                  Repeat regions

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                                                    Information and decorations

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                                                    • %GC
                                                      Shows percentage of Gs & Cs in region
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                                                      Shows the length of the region being displayed
                                                    • Alignment Difference Legend
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