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Sequence and assembly

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Contigs

Track showing underlying assembly contigs.
Sequence

Track showing sequence in both directions. Only displayed at 1Kb and below.

Genes and transcripts

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Coding transcripts only (in coding genes)

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Genes

This track comprises multiple analyses; Gene model manually curated by a member of the scientific community; Gene models produced by Wellcome Sanger Institute
Pseudogenes

WormBase curated pseudogene

ncRNA

RNA-Seq Alignments

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Enable/disable all Cell types - ERP104993
Characterising Schistosoma mansoni stem cell populations

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Enable/disable all Life cycle - ERP000427
Schistosoma mansoni transcriptomics at different life stages

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Enable/disable all Life cycle - ERP014584
Schistosoma mansoni RNASeq male and female characterisation

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Enable/disable all Life cycle - SRP071285
Schistosoma mansoni sex determination

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Enable/disable all Organism parts - ERP016356
S mansoni male and female adult worm reproductive organs pre and post pairing

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Enable/disable all Organism parts - SRP071241
Comparison of gene expression between female Schistosoma mansoni heads and tails

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Enable/disable all Other - ERP002113
Praziquantel mode of action and resistance

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Enable/disable all Other - ERP003608
STUDY THE EFFECT OF TGF beta ON SCHISTOSOME ADULT WORMS

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Enable/disable all Other - ERP015574
Schistosoma mansoni PacBio transcriptome sequencing IsoSeq

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Enable/disable all Other - ERP017466
High throughput sequencing of life stages tissues of Schistosoma mansoni

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Enable/disable all Other - ERP108923
RNAseq analysis of diel rhythms in Schistosoma mansoni

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Enable/disable all Other - ERP113121
RNA seq of intra mammalian developmental stages of Schistosoma mansoni

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Enable/disable all Other - ERP115565
The stage and sex specific transcriptome of the human parasite Schistosoma mansoni

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Enable/disable all Other - ERP128933
The transcriptome of Schistosoma mansoni developing eggs reveals key mediators in pathogenesis and life cycle propagation

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Enable/disable all Other - SRP026308
Functional genomic characterization of germinal cells in larval Schistosoma mansoni

Other - SRP028328

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Enable/disable all Other - SRP032348
Genetic and molecular basis of drug resistance and species-specific drug action in Schistosome parasites

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Enable/disable all Other - SRP035537
SL trans-splicing in Schistosoma mansoni

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Enable/disable all Other - SRP035609
Schistosoma mansoni strain:BRE Transcriptome or Gene expression

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Enable/disable all Other - SRP042222
Schistosoma mansoni Transcriptome or Gene expression

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Enable/disable all Other - SRP063353
Schistosoma mansoni Egg, Adult Male and Female Transcriptome Profiling

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Enable/disable all Other - SRP064960
Schistosoma mansoni Transcriptome or Gene expression

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Enable/disable all Other - SRP101425
Allele Specific expression in male and female Schistosoma mansoni adult worms

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Enable/disable all Other - SRP108901
Schistosoma mansoni strain LE - Transcriptome or Gene expression

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Enable/disable all Other - SRP162361
Schistosoma mansoni strain:LE Transcriptome or Gene expression

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Enable/disable all Other - SRP243831
Time course of Schistosoma mansoni transcriptional response to in vivo praziquantel exposure

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Enable/disable all Other - SRP251773
S mansoni in vivo 5wk old sporocysts & adult worms.

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Enable/disable all Other - SRP252193
Large-scale RNAi screening uncovers new therapeutic targets in the human parasite Schistosoma mansoni

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Enable/disable all Other - SRP322214
Schistosoma mansoni Cercarial Heads versus Tails

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Enable/disable all Response to treatment - SRP017443
Adult stem cells in the human parasite Schistosoma mansoni

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Enable/disable all Response to treatment - SRP067194
Stem cells rejuvenate the schistosome host-parasite interface

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Enable/disable all Response to treatment - SRP093920
Schistosoma mansoni strain:LE Transcriptome or Gene expression

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Enable/disable all Response to treatment - SRP096638
RNA-seq for the study of the effect of histone modifying enzymes (HMEs) inhibitors on gene expression in Schistosoma mansoni

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Enable/disable all Response to treatment - SRP124650
Transcriptional Profiling of Schistosoma mansoni f zfp-1-1(RNAi) parasites

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Enable/disable all Response to treatment - SRP130864
5-AzaC effect on Schistosoma mansoni Transcriptome

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Enable/disable all Response to treatment - SRP163002
Transcriptomic analysis of reduced sensitivity to praziquantel in Schistosoma mansoni

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Enable/disable all Response to treatment - SRP212141
Schistosoma mansoni response to in vivo FPL-64176 exposure

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Enable/disable all Response to treatment - SRP238922
Transcriptional response of Schistosoma mansoni to in vivo praziquantel exposure

Variation

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Somatic mutations

Pairwise whole genome alignments

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Repeat regions

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Information and decorations

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%GC

Shows percentage of Gs & Cs in region
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