Meloidogyne arenaria
BioProject PRJNA340324 | Data Source University of Hull | Taxonomy ID 6304
About Meloidogyne arenaria
The peanut root knot nematode, M. arenaria , is a plant pathogenic nematode, causing significant damage to crops of peanut, vegetables, grasses, fruit ornamentals and tobacco in the Southern United States.
There are 2 alternative genome projects for Meloidogyne arenaria available in WormBase ParaSite: PRJEB8714 PRJNA438575
Genome Assembly & Annotation
Assembly
The assembly was produced using Illumina reads, as described in Szitenberg et al. (2017)
Annotation
The annotation was produced using AUGUSTUS. WormBase obtained it from the authors' GitHub repository.
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Key Publications
- Szitenberg A, Salazar-Jaramillo L, Blok VC, Laetsch DR, Joseph S, Williamson VM, Blaxter ML, Lunt DH. Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change. Genome Biol Evol, 2017;9(10):2844-2861
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Assembly Statistics
| Assembly | ASM369356v1, GCA_003693565.1 |
| Strain | HarA |
| Database Version | WBPS19 |
| Genome Size | 163,746,389 |
| Data Source | University of Hull |
| Annotation Version | 2019-01-WormBase |
Gene counts
| Coding genes | 27,548 |
| Pseudogenes | 2,675 |
| Gene transcripts | 30,223 |
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