WormBase ParaSite HomeVersion: WBPS9 (WS258)

Pristionchus pacificus

BioProject PRJNA12644 | Data Source WormBase | Taxonomy ID 54126

About Pristionchus pacificus

Pristionchus pacificus is part of the diplogastrids, a clade nested within the rhabditid group where C. elegans belongs. P. pacificus is found on several continents, associated with beetles. P. pacificus shares many experimental advantages with C. elegans and is being used for developmental and ecological studies.

Genome Assembly & Annotation

Assembly

The P. pacificus genome has been sequenced by the Sommer group at the Max-Planck Institute for Developmental Biology. The assembly version represented here (P_pacificus-v2) has been current in WormBase since 2010, and also browsable at pristionchus.org. This version has not been submitted to the INSDC.

Annotation

The original gene predictions were made by the Sommer group at the Max-Planck Institute for Developmental Biology. Some of the gene models have since been reviewed and revised by WormBase.

Assembly Statistics

AssemblyP_pacificus-v2
StrainPS312
Database VersionWBPS9
Genome Size172,494,865
Data SourceWormBase
Annotation VersionWS251

Gene counts

Coding genes24,216
Gene transcripts24,239

Learn more about this widget in our help section

This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh

About this species