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Steinernema scapterisci

BioProject PRJNA204942 | Data Source California Institute of Technology | Taxonomy ID 90986

About Steinernema scapterisci

Steinernema scapterisci is a close relative of the insect-parasitic nematode Steinernema carpocapsae.

Genome assembly: S_scapt_v1_submitted

The genome assembly was produced by the California Institute of Technology in collaboration with the University of California Irvine. The version of the genome represented here is that submitted directly to WormBase in 2014, which is similar to, but not exactly the same as, NCBI assembly GCA_000757745.1.

Gene annotation

The gene predictions were made by the Mortazavi laboratory at the University of California Irvine, as described by Dillman et al. (2015).

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Comparative genomics

What can I find? Orthologues, paralogues, and gene trees across multiple species.

More information and statistics

Key Publications

Statistics

AssemblyS_scapt_v1_submitted, Oct 2014
Database VersionWBPS8
Genome Size79,776,474
Data SourceCalifornia Institute of Technology
Annotation Version2014-12-WormBase

Gene counts

Coding genes31,378
Gene transcripts33,149

Assembly Statistics

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This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh

About this species