WormBase ParaSite HomeVersion: WBPS8 (WS256)

Toxocara canis

BioProject PRJNA248777 | Data Source University of Melbourne | Taxonomy ID 6265

About Toxocara canis

The nematode Toxocara canis, or dog roundworm, is a worldwide-distributed intestinal parasite of dogs and other canids, and is thought to be the most common parasite infection of humans in the United States of America. It has a wide host range. Humans are infected by accidental ingestion of infective eggs from dog faeces, causing toxocariasis, an infection of organs such as the liver, lungs, eyes or brain. T. canis has many characteristics that make it a useful model system.

There is 1 alternative genome project for Toxocara canis available in WormBase ParaSite: PRJEB533

Genome assembly: Toxocara_canis_adult_r1.0

The genome of T. canis was sequenced by the Gasser laboratory at the University of Melbourne, as described by Zhu et al (2015). It was assembled and scaffolded using the program SOAPdenovo2.

Gene annotation

The genome annotation was produced by the Gasser laboratory at the University of Melbourne, as described by Zhu et al (2015).

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Comparative genomics

What can I find? Orthologues, paralogues, and gene trees across multiple species.

More information and statistics

Key Publications

Statistics

AssemblyToxocara_canis_adult_r1.0, GCA_000803305.1
StrainPN_DK_2014
Database VersionWBPS8
Genome Size317,115,901
Data SourceUniversity of Melbourne
Annotation Version2016-04-WormBase

Gene counts

Coding genes18,596
Gene transcripts18,596

Assembly Statistics

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This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh

About this species