WormBase ParaSite HomeVersion: WBPS9 (WS258)

Trichinella pseudospiralis

BioProject PRJNA257433 | Data Source University of Melbourne | Taxonomy ID 6337

About Trichinella pseudospiralis

One of the Trichinella genus of parasitic nematodes, the causative agents of trichinosis (also known as trichinellosis). Trichinella pseudospiralis is a species which does not encapsulate in host muscle tissue and infects mammals and birds worldwide. This strain of T. pseudospiralis, ISS176, had a tawny eagle from Kazakhstan as its original host.

There are 4 alternative strains from this genome project for Trichinella pseudospiralis available in WormBase ParaSite: ISS13 ISS141 ISS470 ISS588

Genome Assembly & Annotation

Assembly

The genome of T. pseudospiralis was produced by the Gasser laboratory at the University of Melbourne, as part of the assembly and analysis of all 12 recognized Trichinella species (described in Korhonen et al (2016)).

Annotation

The gene predictions were made by the Gasser laboratory at the University of Melbourne.

Key Publications

Assembly Statistics

AssemblyT4_ISS176_r1.0, GCA_001447645.1
StrainISS176
Database VersionWBPS9
Genome Size49,152,658
Data SourceUniversity of Melbourne
Annotation Version2016-05-WormBase

Gene counts

Coding genes12,455
Gene transcripts16,961

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About this species