WormBase ParaSite HomeVersion: WBPS8 (WS256)

Trichinella spiralis

BioProject PRJNA257433 | Data Source University of Melbourne | Taxonomy ID 6334

About Trichinella spiralis

The nematode Trichinella spiralis is a roundworm with an unsegmented body that is a parasite of swine. Trichinosis is a disease of swine that can pass to humans by the eating of undercooked pork, digestive juices from the stomach dissolve the capsule-like cyst and release the parasites. The larvae then penetrate into the intestine where they mature and mate.

There is 1 alternative genome project for Trichinella spiralis available in WormBase ParaSite: PRJNA12603

Genome assembly: T1_ISS3_r1.0

The genome of T. spiralis was produced by the Gasser laboratory at the University of Melbourne, as part of the assembly and analysis of all 12 recognized Trichinella species (described in Korhonen et al (2016)).

Gene annotation

The gene predictions were made by the Gasser laboratory at the University of Melbourne.

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Comparative genomics

What can I find? Orthologues, paralogues, and gene trees across multiple species.

More information and statistics

Key Publications

Statistics

AssemblyT1_ISS3_r1.0, GCA_001447595.1
StrainISS3
Database VersionWBPS8
Genome Size50,025,957
Data SourceUniversity of Melbourne
Annotation Version2016-05-WormBase

Gene counts

Coding genes14,737
Gene transcripts19,244

Assembly Statistics

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This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh

About this species