WormBase ParaSite HomeVersion: WBPS8 (WS256)

Trichuris trichiura

BioProject PRJEB535 | Data Source Wellcome Trust Sanger Institute | Taxonomy ID 36087

About Trichuris trichiura

The nematode Trichuris trichiura, or human whipworm, is an intestinal parasite of humans currently thought to infect up to 1 billion people worldwide resulting in considerable morbidity.

Genome assembly: TTRE2.1

The T. trichiura genome has been sequenced by the Parasite Genomics group at the Wellcome Trust Sanger Institute, in collaboration with Richard Grencis (University of Manchester), as described by Foth et al (2014). The assembly version represented here is INSDC assembly TTRE2.1.

Gene annotation

The gene predictions were made by the Parasite Genomics group at the Wellcome Trust Sanger Institute, as described by Foth et al (2014).

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Comparative genomics

What can I find? Orthologues, paralogues, and gene trees across multiple species.

More information and statistics

Key Publications

Statistics

AssemblyTTRE2.1, GCA_000613005.1
StrainRepublic of Ecuador
Database VersionWBPS8
Genome Size75,496,394
Data SourceWellcome Trust Sanger Institute
Annotation Version2014-06-50HGPpatch

Gene counts

Coding genes9,650
Gene transcripts9,650

Assembly Statistics

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This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh

About this species