Genome assembly: TTRE2.1
The T. trichiura genome has been sequenced by the Parasite Genomics group at the Wellcome Trust Sanger Institute, in collaboration with Richard Grencis (University of Manchester), as described by Foth et al (2014). The assembly version represented here is INSDC assembly TTRE2.1.
The gene predictions were made by the Parasite Genomics group at the Wellcome Trust Sanger Institute, as described by Foth et al (2014).
What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.
What can I find? Orthologues, paralogues, and gene trees across multiple species.
- Foth BJ, Tsai IJ, Reid AJ, Bancroft AJ, Nichol S, Tracey A, Holroyd N, Cotton JA, Stanley EJ, Zarowiecki M, Liu JZ, Huckvale T, Cooper PJ, Grencis RK, Berriman M. Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction. Nat Genet, 2014;46(7):693-700
|Strain||Republic of Ecuador|
|Data Source||Wellcome Trust Sanger Institute|