Meloidogyne arenaria
BioProject PRJNA438575 | Data Source RIKEN | Taxonomy ID 6304
About Meloidogyne arenaria
The peanut root knot nematode, M. arenaria , is a plant pathogenic nematode, causing significant damage to crops of peanut, vegetables, grasses, fruit ornamentals and tobacco in the Southern United States.
There are 2 alternative genome projects for Meloidogyne arenaria available in WormBase ParaSite: PRJEB8714 PRJNA340324
Genome Assembly & Annotation
Assembly
The genome was sequenced using PacBio long reads, as described in Sato et al (2018).
Annotation
The annotation was produced using AUGUSTUS and submitted to WormBase in September 2018 by Dr Kazuki Sato.
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Key Publications
- Sato K, Kadota Y, Gan P, Bino T, Uehara T, Yamaguchi K, Ichihashi Y, Maki N, Iwahori H, Suzuki T, Shigenobu S, Shirasu K. High-Quality Genome Sequence of the Root-Knot Nematode Meloidogyne arenaria Genotype A2-O. Genome Announc, 2018;6(26):e00519-18
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Assembly Statistics
| Assembly | ASM313380v1, GCA_003133805.1 |
| Strain | A2-O Okinawa_01 |
| Database Version | WBPS19 |
| Genome Size | 284,032,373 |
| Data Source | RIKEN |
| Annotation Version | 2018-08-WormBase |
Gene counts
| Coding genes | 76,700 |
| Pseudogenes | 34 |
| Gene transcripts | 76,734 |
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