Globodera rostochiensis

BioProject PRJEB13504 | Data Source University of Edinburgh | Taxonomy ID 31243

About Globodera rostochiensis

Globodera rostochiensis, commonly known as the golden nematode, is a plant pathogenic nematode. It infects plants of the Solanaceae family, such as potatoes and tomatoes.

There are 2 alternative genome projects for Globodera rostochiensis available in WormBase ParaSite: PRJNA695196 PRJNA695196

Genome Assembly & Annotation

Assembly

The genome of G. rostochiensis was produced by the Blaxter Laboratory at the University of Edinburgh in collaboration with the Parasite Genomics Group at the Wellcome Trust Sanger Institute, as described in Eves-van den Akker et al (2016)

Annotation

The gene predictions were produced by the Blaxter Laboratory at the University of Edinburgh using an automated approach complemented by manual curation, as described in Eves-van den Akker et al (2016)

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Key Publications

Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EG, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A, Grenier E, Montarry J, Mimee B, Duceppe MO, Boyes I, Marvin JM, Jones LM, Yusup HB, Lafond-Lapalme J, Esquibet M, Sabeh M, Rott M, Overmars H, Finkers-Tomczak A, Smant G, Koutsovoulos G, Blok V, Mantelin S, Cock PJ, Phillips W, Henrissat B, Urwin PE, Blaxter M, Jones JT. The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biol, 2016;17(1):124