WormBase ParaSite HomeVersion: WBPS14 (WS271)

Tools

We provide a number of ready-made tools for processing both our data and yours. We routinely delete results from our servers after 10 days, but if you have an account you will be able to save the results indefinitely.

Processing your data

NameDescriptionDocumentationUpload limit
Variant Effect PredictorAnalyse your own variants and predict the functional consequences of known and unknown variants via our Variant Effect Predictor (VEP) tool.Documentation50MB
BLAST/BLATSearch our genomes for your DNA or protein sequence.Documentation50MB
g:ProfilerGene set enrichment. WormBase ParaSite genomes and the results of our functional analysis annotation are processed by g:Profiler to offer gene set enrichment analysis as a service. Documentation

Accessing WormBase ParaSite data

NameDescriptionDocumentation
BioMartUse this data-mining tool to export custom datasets from WormBase ParaSite.Documentation
REST serverAccess WormBase ParaSite using your favourite programming languageDocumentation