Meloidogyne enterolobii
BioProject PRJNA340324 | Data Source University of Hull | Taxonomy ID 390850
About Meloidogyne enterolobii
The nematode _ Meloidogyne enterolobii_, a root-knot nematode, infects a variety of crops such as eggplant, bell pepper, soybean, sweet potato, tobacco, tomato, or watermelon. It is able to reproduce on Mi-1 gene carrying crops that are resistant to other root-knot nematodes, making the species a growing economic threat.
Genome Assembly & Annotation
Assembly
The assembly was produced using Illumina reads, as described in Szitenberg et al. (2017)
Annotation
The annotation was produced using AUGUSTUS. WormBase obtained it from the authors' GitHub repository.
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Key Publications
- Szitenberg A, Salazar-Jaramillo L, Blok VC, Laetsch DR, Joseph S, Williamson VM, Blaxter ML, Lunt DH. Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change. Genome Biol Evol, 2017;9(10):2844-2861
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Assembly Statistics
| Assembly | ASM369367v1, GCA_003693675.1 |
| Strain | L30 |
| Database Version | WBPS19 |
| Genome Size | 162,967,259 |
| Data Source | University of Hull |
| Annotation Version | 2019-01-WormBase |
Gene counts
| Coding genes | 29,473 |
| Pseudogenes | 1,473 |
| Gene transcripts | 30,946 |
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