Meloidogyne floridensis
BioProject PRJNA340324 | Data Source University of Hull | Taxonomy ID 298350
About Meloidogyne floridensis
The nematode Meloidogyne floridensis, a root-knot nematode, is able to infect the roots of many plants, including peach (Prunus persica), watermelon and tomatoes.
There is 1 alternative genome project for Meloidogyne floridensis available in WormBase ParaSite: PRJEB6016
Genome Assembly & Annotation
Assembly
The assembly was produced using Illumina reads, as described in Szitenberg et al. (2017)
Annotation
The annotation was produced using AUGUSTUS. WormBase obtained it from the authors' GitHub repository.
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Key Publications
- Szitenberg A, Salazar-Jaramillo L, Blok VC, Laetsch DR, Joseph S, Williamson VM, Blaxter ML, Lunt DH. Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change. Genome Biol Evol, 2017;9(10):2844-2861
Assembly Statistics
| Assembly | ASM369360v1, GCA_003693605.1 |
| Strain | SJF1 |
| Database Version | WBPS19 |
| Genome Size | 74,846,012 |
| Data Source | University of Hull |
| Annotation Version | 2019-01-WormBase |
Gene counts
| Coding genes | 12,762 |
| Pseudogenes | 1,651 |
| Gene transcripts | 14,413 |
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