Trichinella patagoniensis
BioProject PRJNA257433 | Data Source University of Melbourne | Taxonomy ID 990121
About Trichinella patagoniensis
One of the Trichinella genus of parasitic nematodes, the causative agents of trichinosis (also known as trichinellosis). Trichinella patagoniensis is a species which encapsulates in host muscle tissue. It is found to infect carnivorous mammals, such as cougars, in South America.
Genome Assembly & Annotation
Assembly
The genome of T. patagoniensis was produced by the Gasser laboratory at the University of Melbourne, as part of the assembly and analysis of all 12 recognized Trichinella species (described in Korhonen et al (2016)).
Annotation
The gene predictions were made by the Gasser laboratory at the University of Melbourne.
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Key Publications
- Korhonen PK, Pozio E, La Rosa G, Chang BC, Koehler AV, Hoberg EP, Boag PR, Tan P, Jex AR, Hofmann A, Sternberg PW, Young ND, Gasser RB. Phylogenomic and biogeographic reconstruction of the Trichinella complex. Nat Commun, 2016;7():10513
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Assembly Statistics
| Assembly | T12_ISS2496_r1.0, GCA_001447655.1 |
| Strain | ISS2496 |
| Database Version | WBPS19 |
| Genome Size | 49,773,209 |
| Data Source | University of Melbourne |
| Annotation Version | 2016-05-WormBase |
Gene counts
| Coding genes | 15,319 |
| Gene transcripts | 19,538 |
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