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RNASeq Ancylostoma ceylanicum

Ancylostoma ceylanicum - public RNASeq studies

Analysed

SRP035476: Ancylostoma ceylanicum transcriptome

Cornell University

The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families. (Schwarz .. Aroian, 2015)

Design: 13 conditions

Condition num. replicates Developmental stage Incubation Treatment
12 days post infection 1 12 days post infection
18 d.p.i + incubate, Cry5B treatment 1 18 days post infection culture media 100ug/mL Cry5B
18 d.p.i + incubate, control treatment 1 18 days post infection culture media HEPES buffer (control)
18 d.p.i. + incubate with SB203580, Cry5B treatment 1 18 days post infection 50uM SB203580 (p38 MAPK inhibitor) 100ug/mL Cry5B
18 d.p.i. + incubate with SB203580, control treatment 1 18 days post infection 50uM SB203580 (p38 MAPK inhibitor) HEPES buffer (control)
18 d.p.i. 100ug/mL Cry5B treatment 1 18 days post infection 100ug/mL Cry5B
18 d.p.i. albendazole treatment 1 18 days post infection albendazole
18 d.p.i. control treatment 1 18 days post infection HEPES buffer (control)
19 days post infection 1 19 days post infection
24 hours post infection 1 24 hours post infection
5 days post infection 1 5 days post infection
Infectious L3 larvae 1 Infectious L3 larvae
Infectious L3 larvae, incubated 1 Infectious L3 larvae culture media

SRP058598: Ancylostoma ceylanicum Genome Sequencing

The Genome Institute

Ancylostoma ceylanicum Project page
Parasitic Nematode Project
Project Information

Design: 13 conditions

Condition num. replicates Developmental stage Sex Culture conditions
24hr small intestine 2 24hr small intestine
24hr stomach 3 24hr stomach
48hr L3 4 48hr L3
72hr L3 3 72hr L3
72hr L4 2 72hr L4
L3 4 L3
L4 8day adult female 2 L4 8day adult female
adult female 5 adult female
adult male 7 adult male
dog feces, activated (L3) 3 L3 dog feces, activated
dog feces, infective (L3) 3 L3 dog feces, infective
dog feces, nonactivated (L3) 1 L3 dog feces, nonactivated
gut 2 gut