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RNASeq Dirofilaria immitis

Dirofilaria immitis - public RNASeq studies

Analysed

SRP048819: Dirofilaria immitis Transcriptome or Gene expression

New England Biolabs

Design: 2 conditions

Condition num. replicates Developmental stage Sample description
L3 in mosquito 1 L3 mosquito
microfilariae in blood 1 microfilariae blood

SRP057178: Tissue-Specific Transcriptomics and Proteomics of a Filarial Nematode and its Wolbachia Endosymbiont

New England Biolabs

Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiont. (Luck .. Slatko, 2015)

Design: 4 conditions

Condition num. replicates Developmental stage Endosymbiont Organism part Sex Strain
body wall 2 adult Wolbachia body wall female TRS
head 2 adult Wolbachia head female TRS
intestine 2 adult Wolbachia intestine female TRS
uterus 2 adult Wolbachia uterus female TRS

Other

These studies are available in ENA, and the reads successfully align to our genomes.
They have not been included in our analysis for one of the following reasons:
Failed to meet minimal criteria for differential expression analysis, failure to pass data quality filters, or we were unable to interpret accompanying metadata.

SRP010089: Dirofilaria immitis Transcriptome or Gene expression

Department of Parasitology, Sichuan Agricultural University

Novel insights into the transcriptome of Dirofilaria immitis. (Fu .. Yang, 2012)

1 run in ENA

SRP010846: MicroRNA discovery and analysis of Dirofilaria immitis by deep sequencing.

Department of Parasitology, Sichuan Agricultural University

Identification of Dirofilaria immitis miRNA using illumina deep sequencing. (Fu .. Yang, 2013)

1 run in ENA