RNASeq Schistocephalus solidus

Schistocephalus solidus - public RNASeq studies

Transcriptome sequence for non-infective, infective and adult Schistocephalus solidus worms.
1 other study

Analysed

SRP066813: Transcriptome sequence for non-infective, infective and adult Schistocephalus solidus worms.

Laval University

Downloads

Characteristics and conditions per run
Counts of aligned reads per run (HTSeq2)
Gene expression (TPM) per run
Gene expression (TPM) per condition as median across runs
Differential expression
- Summary file: developmental stage
- Full result files for 3 contrasts (zipped)

Design: 3 conditions

Condition	num. replicates	Developmental stage
adult	4	adult
infective plerocercoid	4	infective plerocercoid
non-infective plerocercoid	7	non-infective plerocercoid

Other

These studies are available in ENA, and the reads successfully align to our genomes.
They have not been included in our analysis for one of the following reasons:
Failed to meet minimal criteria for differential expression analysis, failure to pass data quality filters, or we were unable to interpret accompanying metadata.

Schistocephalus solidus - public RNASeq studies

Table of Contents

Analysed

SRP066813: Transcriptome sequence for non-infective, infective and adult Schistocephalus solidus worms.

Laval University

Downloads

Characteristics and conditions per run

Counts of aligned reads per run (HTSeq2)

Gene expression (TPM) per run

Gene expression (TPM) per condition as median across runs

Differential expression

Design: 3 conditions

Other

ERP007069: Identification of virulence genes in Schistocephalus solidus

Max Planck Institute for Evolutionary Biology, Ploen, Germany

Information