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RNASeq Schistosoma haematobium

Schistosoma haematobium - public RNASeq studies

Analysed

SRP161986: Transcriptome sequencing of Schistosoma haematobium x bovis adult worm hybrids

University of Perpignan Via Domitia

Design: 8 conditions

Condition num. replicates Isolate Sample name Sex Developmental stage Geo loc name Host Organism part
F1 Schistosoma bovis x haematobium female 3 homospecific pairing F1 Schistosoma bovis x haematobium female female adult France: Perpignan Mesocricetus auratus whole organism
F1 Schistosoma bovis x haematobium male 3 homospecific pairing F1 Schistosoma bovis x haematobium male male adult France: Perpignan Mesocricetus auratus whole organism
F1' Schistosoma haematobium x bovis female 3 homospecific pairing F1' Schistosoma haematobium x bovis female female adult France: Perpignan Mesocricetus auratus whole organism
F1' Schistosoma haematobium x bovis male 3 homospecific pairing F1' Schistosoma haematobium x bovis male male adult France: Perpignan Mesocricetus auratus whole organism
Schistosoma haematobium female (heterospecific pairing) 3 heterospecific pairing Schistosoma haematobium female (heterospecific pairing) female adult France: Perpignan Mesocricetus auratus whole organism
Schistosoma haematobium female (homospecific pairing) 3 homospecific pairing Schistosoma haematobium female (homospecific pairing) female adult France: Perpignan Mesocricetus auratus whole organism
Schistosoma haematobium male (heterospecific pairing) 3 heterospecific pairing Schistosoma haematobium male (heterospecific pairing) male adult France: Perpignan Mesocricetus auratus whole organism
Schistosoma haematobium male (homospecific pairing) 3 homospecific pairing Schistosoma haematobium male (homospecific pairing) male adult France: Perpignan Mesocricetus auratus whole organism

Other

These studies are available in ENA, and the reads successfully align to our genomes.
They have not been included in our analysis for one of the following reasons:
Failed to meet minimal criteria for differential expression analysis, failure to pass data quality filters, or we were unable to interpret accompanying metadata.

SRP011039: Schistosoma haematobium Genome sequencing and assembly