WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
e.g. O. volvulus, PRJNA60051, WBGene00262434, Bma-eat-4, eat-4 or metallopeptidase
RNASeq Steinernema feltiae

Steinernema feltiae - public RNASeq studies

Analysed

SRP058023: Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks

University of California, Irvine

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Design: 4 conditions

Condition num. replicates Developmental stage
RNA IJ 2 RNA IJ
RNA L1 2 RNA L1
RNA embryo 2 RNA embryo
RNA young adult 2 RNA young adult

SRP084244: Comparative transcriptomics of Steinernema and Caenorhabditis single embryos reveals gene expression divergence during early embryogenesis

University of California, Irvine

Comparative Transcriptomics of Steinernema and Caenorhabditis Single Embryos Reveals Orthologous Gene Expression Convergence during Late Embryogenesis. (Macchietto .. Mortazavi, 2017)

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Design: 11 conditions

Condition num. replicates Developmental stage
1.5-fold 4 1.5-fold
2-cell 4 2-cell
2-fold 4 2-fold
24-44-cell 4 24-44-cell
4-cell 4 4-cell
64-78-cell 4 64-78-cell
8-cell 4 8-cell
L1 4 L1
comma 4 comma
moving 4 moving
zygote 4 zygote

SRP159122: A core set of venom proteins are secreted by entomopathogenic nematodes in the genus Steinernema

University of California Irvine

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Design: 9 conditions

Condition num. replicates Developmental stage Organism part Strain Timepoint Treatment
Infective Juvenile 3 Infective Juvenile (IJ) whole organism SN
activated in a live waxworm, 12 hours 3 Infective Juvenile (IJ) whole organism SN 12hr activated in a live waxworm
activated in a live waxworm, 15 hours 3 Infective Juvenile (IJ) whole organism SN 15hr activated in a live waxworm
activated in a live waxworm, 3 hours 3 Infective Juvenile (IJ) whole organism SN 3hr activated in a live waxworm
activated in a live waxworm, 6 hours 3 Infective Juvenile (IJ) whole organism SN 6hr activated in a live waxworm
activated in a live waxworm, 9 hours 3 Infective Juvenile (IJ) whole organism SN 9hr activated in a live waxworm
activated in waxworm homogenate, 3 hours 3 Infective Juvenile (IJ) whole organism SN 3hr activated in waxworm homogenate
activated in waxworm homogenate, 6 hours 3 Infective Juvenile (IJ) whole organism SN 6hr activated in waxworm homogenate
activated in waxworm homogenate, 9 hours 3 Infective Juvenile (IJ) whole organism SN 9hr activated in waxworm homogenate