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RNASeq Strongyloides ratti

Strongyloides ratti - public RNASeq studies


ERP002187: Strongyloides ratti molecular basis of parasitism

Wellcome Sanger Institute

Design: 2 conditions

Condition num. replicates Developmental stage Sex Strain
Free-living female 3 Free-living adult female ED321Het
Parasitic female 3 Parasitic adult female ED321Het


These studies are available in ENA, and the reads successfully align to our genomes.
We have decided not to include them in our analysis.
Either they failed to meet minimal criteria for inclusion, we've been asked to exclude them for data quality reasons, or we were unable to interpret the metadata.

ERP001672: Transcriptome sequencing of Strongyloides ratti

Wellcome Sanger Institute

2 runs in ENA

SRP016022: microRNAs in C. elegans, P. pacificus, and S. ratti: Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes

SRP087716: Pristionchus sp. n. 1 VS-2015 Transcriptome or Gene expression