Toxocara canis - public RNASeq studies
Analysed
SRP051082: Toxocara canis isolate:PN_DK_2014 Genome sequencing and assembly
University of Melbourne
Genetic blueprint of the zoonotic pathogen Toxocara canis. (Zhu .. Gasser, 2015)
Design: 7 conditions
| Condition | num. replicates | Sample description |
|---|---|---|
| L3 | 1 | L3 |
| female gut | 1 | female gut |
| female reproductive tract | 1 | female reproductive tract |
| female whole worm | 1 | female whole worm |
| male gut | 1 | male gut |
| male reproductive tract | 1 | male reproductive tract |
| male whole worm | 1 | male whole worm |
Other
These studies are available in ENA, and the reads successfully align to our genomes.
We have decided not to include them in our analysis.
Either they failed to meet minimal criteria for inclusion, we've been asked to exclude them for data quality reasons, or we were unable to interpret the metadata.
SRP066833: Comparative transcriptomic analyses of male and female adult Toxocara canis.
veterinary medicine, Southwest university
Comparative transcriptomic analyses of male and female adult Toxocara canis. (Zhou .. Xia, 2017)
2 runs in ENA
Release 15 - October 2020
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