WormBase ParaSite HomeVersion: WBPS17 (WS282)
RNASeq Toxocara canis

Toxocara canis - public RNASeq studies

Analysed

SRP051082: Toxocara canis isolate:PN_DK_2014 Genome sequencing and assembly

University of Melbourne

Genetic blueprint of the zoonotic pathogen Toxocara canis. (Zhu .. Gasser, 2015)

Design: 7 conditions

Condition num. replicates Sample description
L3 1 L3
female gut 1 female gut
female reproductive tract 1 female reproductive tract
female whole worm 1 female whole worm
male gut 1 male gut
male reproductive tract 1 male reproductive tract
male whole worm 1 male whole worm

Other

These studies are available in ENA, and the reads successfully align to our genomes.
They have not been included in our analysis for one of the following reasons:
Failed to meet minimal criteria for differential expression analysis, failure to pass data quality filters, or we were unable to interpret accompanying metadata.

SRP066833: Comparative transcriptomic analyses of male and female adult Toxocara canis.