WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18

FTP Download

You can download via a browser from our FTP site, use a script, or even use rsync from the command line.

Globus

For rapid bulk download of files, the Ensembl FTP site is available as an end point in the Globus Online system. In order to access the data you need to sign up for an account with Globus, install the Globus Connect Personal software and setup a personal endpoint to download the data. The Ensembl data is hosted at the EMBL-EBI end point called “Shared EMBL-EBI public endpoint”. Data from the Ensembl FTP site can then be found under the "/gridftp/ensemblorg/pub" directory within the EMBL-EBI public end point.

Show/hide columns
  • Species
  • BioProject
  • Genomic
  • Masked Genomic
  • Soft-masked Genomic
  • Annotations
  • Proteins
  • Full-length Transcripts
  • CDS Transcripts
  • Orthologues
  • Paralogues
SpeciesBioProjectGenomicMasked GenomicSoft-masked GenomicAnnotationsProteinsFull-length TranscriptsCDS TranscriptsOrthologuesParalogues
Acanthocheilonema viteaePRJEB1697FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Acrobeloides nanusPRJEB26554FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Allodiplogaster sudhausiPRJEB48369FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ancylostoma caninumPRJNA72585FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ancylostoma ceylanicumPRJNA231479FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ancylostoma ceylanicumPRJNA72583FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ancylostoma duodenalePRJNA72581FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Angiostrongylus cantonensisPRJEB493FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Angiostrongylus cantonensisPRJNA350391FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Angiostrongylus costaricensisPRJEB494FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Angiostrongylus vasorumPRJNA663250FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Anisakis simplexPRJEB496FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides besseyiPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides besseyiPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides besseyiPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides besseyiPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides bicaudatusPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Aphelenchoides fujianensisPRJNA834627FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ascaris lumbricoidesPRJEB4950FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ascaris suumPRJNA62057FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Ascaris suumPRJNA80881FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Atriophallophorus winterbourniPRJNA636673FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Auanema sp. JU1783PRJEB51845FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Bradynema listronotiPRJNA842945FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Brugia malayiPRJNA10729FASTAFASTAFASTAGFF3 / GTFFASTAFASTAFASTATSVTSV
Showing 1 to 25 of 274 entries
<<<12345>>>