WormBase ParaSite HomeVersion: WBPS14 (WS271)

Downloads page

This page displays the table of files available for download. The table can be filtered by species by typing in the filter box at the top left of the table. Columns can be hidden using the 'show/hide columns' button.

A number of gzipped downloads are available for each species:

Genomic: Raw FASTA genome file
Masked Genomic: Genome FASTA with repeat regions hard-masked
Soft-masked Genomic: Genome FASTA with repeat regions soft-masked
Annotations: GFF3 file containing all annotations
Proteins: FASTA protein file
mRNA Transcripts: FASTA of the spliced full-length transcripts
CDS Transcripts: FASTA of the spliced CDS-portion of the protein coding transcripts

The specification for GFF3 format can be found here.