WormBase ParaSite HomeVersion: WBPS16 (WS279)

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[+] Nematoda (Roundworms)
[+] Clade V

Statistics

  • Version: WBPS16 (September 2021)
  • WormBase Version: WS279
  • 202 genomes, representing 163 species

Announcements

AlphaFold added new 3D protein structures of parasitic worms

posted 3 months ago by Dionysis Grigoriadis

The latest AlphaFold database update in January 2022, added three-dimensional (3D) structures of complete proteomes for 27 new organisms relevant to neglected tropical diseases and antimicrobial resistance including 7 parasitic worms from WormBase ParaSite. Determining the three-dimensional (3D) structure of a protein has been a computational challenge for decades, and can provide essential insights into [read more]

Blog

AlphaFold added new 3D protein structures of parasitic worms

posted 3 months ago by Dionysis Grigoriadis

The latest AlphaFold database update in January 2022, added three-dimensional (3D) structures of complete proteomes for 27 new organisms relevant to neglected tropical diseases and antimicrobial resistance including 7 parasitic worms from WormBase ParaSite. Determining the three-dimensional (3D) structure of a protein has been a computational challenge for decades, and can provide essential insights into [read more]

BSP workshop slides

posted 10 months ago by Faye Rodgers

Thanks to everybody who made it to our virtual workshop at the 2021 BSP meeting. For those who couldn’t, here are the slides that were presented. As ever, feel free to write to us at parasite-help@sanger.ac.uk with any questions.

On identifiers from external databases and past releases

posted 3 years ago by Wojtek Bazant

(updated in WBPS13 to reflect archiving functionality and mention gene IDs in GFF dumps) As sequencing projects progress and yield improved data, we occasionally update genomes on the site to provide the best resources available. An example of this is Schistosoma mansoni, released in WBPS11. The authors of the new S. mansoni annotation preserved identifiers [read more]

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