WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
e.g. O. volvulus, PRJNA60051, WBGene00262434, Bma-eat-4, eat-4 or metallopeptidase

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Gene: Bma-dcap-2 WBGene00224532

Description

Dcp2, box A domain containing protein [Source:UniProtKB/TrEMBL;Acc:A0A7I4NM59]

Location

SuperContig Bm_v4_ChrX_scaffold_001: 50,988-56,947 reverse strand.

INSDC Sequence ID

CAAKNF010000196.1

About this gene

This gene has 2 transcripts (splice variants) and 235 orthologues.

Gene Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcripts

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Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
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Transcript IDbpProteinBiotypeUniProt
Bm4271a.11928568aa
 
Protein coding
A0A0K0JDX7 A0A4E9EPE9
Bm4271b.11491496aa
 
Protein coding
A0A7I4NM59

Marked-up sequence

Download sequenceBLAST this sequence
Exons
  • Bma-dcap-2 exons
  • All exons in this region
Variants
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▼▲
>supercontig:Bmal-4.0:Bm_v4_ChrX_scaffold_001:50388:57547:-1
TTCAGTTTTTTGATTGTTGAATGAATAATTTTGTGCTTATTGTAGAGCTTCCTTTTCTTA
AAAATTATTTACAACTATACACTTCCTTATTTCTTCATTTACATTACTTCTTGGGAATCA
TTGTGATTTTGATATTATTGTTTAACTTTTGACATAGTACTGATTGTTCCATATTAGTGT
TAAAGTATCATTTCATATAGATTTATTGCATTTTCAATTTAAGTCTTAGCTACCTAGTAC
TGATTAGTGAATAGAACAAATGCTGACAGAAGATTGAGTGCTAGGTGTATATGAAATGCA
TGAGACAGGTCCACAACGATTCATTTTCGACACATGCACTTGTTAGGGGATAACTTAGAA
TAATAGTGTTATCTTGCTAAAATGAATAATTCAAGATAGTTATCATCTTAAAGTTATCAT
ATGCGAATTTCATAGGACATCTAAAAATAAGGTATATACAGATTTCTTAGAATAATTTTA
CAATAAAAATTCCAATTTTTGATTCAGGTGATACGACGACAGTTTATCCGTTACAAGCAG
TGATGATATCGAATTGATGAAAGATCTCGAAATACTATTTCAAGCATTTGTAAATTTTAG
ATGCTAAAGAGGATTGAATTGGTGAGTGGTTTGTGAACAATATGATTCGTAAACAGCACC
CCATACGAATGACAGTTTATAACCGAAATGTGCGGAGTACTGATTCCGGTGATATTAGTG
GTAGTGGTAAGTTATTTGTTGTATTTTTGTTACCTTGGAAGATCGAACTTGTTTTTATTT
CTCGGAGTAGTGAGAAGTTTACAATTTCCATGTAAGATATGCCACATTTTGTCTTCATTT
ATTCAGAAGCTAAAATACGAAAATTTCATTGCATATAATTTTTTCATGTGGATTGCCACG
TACATAACAGGGAATTCAGTTCCTACTTTGAAGGTGTTGGGATTGAACCTTTCATCTTAT
ACTGCTATAAAATGTTAAAATAGGATTCTTTGAAGACATTCTATTAAGAGACTAGGTTTT
TTTTTATTATTTTGTTTTTTTTTTTTTTTTTTTTTTGCGTGTTTCGTCTTGGTTTCTTTC
TTCTACATTAATAGAACTTCGATTTGTATCGTCGATCGAATGAATATTTAAGAACTTATC
AGGAAATGGTGACAAAAGCGAAAATTCACGACGTGGTCGACAAAAAAGTGGTTCAAAGAG
GAATAGTGTTGGAGCAAGAATGTCCAAGGGTAATAATGTTTTTACTGCATTCTCATTTTC
AGTGATATTAGGACCTTATTTTTATTTCAAGATATTGGAATTCAGACTTTTAAAATAAGT
ATGCTAACCATAATTCAGTTTTGAATTTTCTGCTCGGTGTATTAATTTAAATTATAGATT
ATATGCAGAATTGCAATCTTCGCATGATCCACGTACTTATTGTGGTTTTCAGGATCACTC
AATGAATCTTCAGATTCAAGGGCGAAAACTTCTTTGTCATTTGGTCCACCCATACCTGAA
GATATTTTAGATGATCTTTGCTTCCGATTCCTTATCAATATACCAGACGATCAGGTAATT
CATATGTTACCTTTAACTGGCATTCAATCTCTTCAGTGCACTGAGTGTTCAGATTTCATT
ATTTATTTCTAACAATTGGACGGTTTTCTGACCCAAACAATTCATTGTTTTTCAGAAAAA
TGCTCCTGTACGACTCTGCTTTCAAATCGAATTGGCACATTGGTTTTATATAGATTTTTA
TTGCAAAGGGAATAATTCAAATGTTAAATGTCCTGAAGTGAGCATGAGAGATTTGGTCGG
GTGAGTGATCATAAAGTCTTCCTTTAAGGTTATTAATGATACGATTTTATATATGAACTT
AATTTTCAAAAAAAAAAAAAAAAAAATTATAATTTCAAAAAATTAGCTTTTAGCTTATAC
TTATTTGTTCTTAAAGCTCTTCAGCGACCTCATCTTCTGGTGAAAGGAGGGAAAGCTCAA
TCGTAAAGATAGTTTCTTTGTCTTTGCATCACTAACTGCAGTTTTGTTTAGGCAAATATT
CAACCATTGTGATTTCCTTATCCAATACACAGACAACGTAGACAAGGTAATTTATAAGAG
TCATTTTTTAAGTTTAAGTTCTGCTCATCATTAGTCTTTTTAGTGATCAATAATGCTCCT
GAAACTTTACTGATAATCTGATGCAGGTGATGGAAGAATGGCGTATTTATAAGTCTGGTG
TGCCAACATATGGTGCTGCACTCTTGGATAGCTCACTGAATTACGTGCTATTAGTACAGG
GATATTTTGCAAAGAACAGTTGGGGATTTCCGAAGGGAAAAGTTTGTTGATTTTTGAAAG
TTTTTAAAACGACTAGTAAAATGTTATTTGTTGGTCATGTGCGAATACTTAAAAATCATT
TCTATTCCTAATGTATGACAGTGTATCTTTCTGCATGCAAAATATTTTAGTGGTAATGTT
AGTTCATAGCAAAATACTACCTGAGGAAACACACTGATAGTGGGGGTGAGCAAAAGTTAA
AATTGTATCGGAAGGATAAGTGGCTTTAAAAATGTCTGCACAAGGGATGATAAGAATGTT
TTTTATAGAGAAATTTTAATAATAGCCAGCATAATTAATTTCTTTGATGCAATATTCAGG
AAAGATTTGACTTAGTTTGCAAGACGCATGCAAAACCGAAAGTGTGAATAAGCATGTAGT
TTAAGCGGAATAGGTGGCAGAAAAAAGTGGAATATATAAAGAAATCAAGCCGCTTTTTGT
GACTCACTACAATAAAATTTTTTAATTGGGTGAATAATGGATATTAAAACTCCATTGTTT
ACACAAGGGATGATAAGAATGACTATTCAAACTTTTGCTTAGCATTTGTATGTATATTGT
TCATTACTATACAAGCATCTGGAGCAATACATACTGCAGATGATTGTGATATATCTCGTT
CATGCCACAACGCAACATTTTCTAATGCAGGAAATGCGGAACTACGTATAAACATGAGAG
CCCAGTTATTTTTTCACCTAAAATAAGACTGCACTTTTGTGGCATGGTAGAGCTTTCTTT
CTTTATAAATGACGAATTGATATAACTTACACCGAGCTAGTTTTATAGGATGAACTGATA
AGCAAACTTCGTATTACTGAAAAAAAATGTGTGCTAATTGCCATATTTTCTAAAAATACA
CGCATATATTAAGTATTAGCCCCTTAACTATTAAAAAAATAAAAAAAAAAGTGAGTTTTA
ACAGGAAGTAATTGATCGTAAATTTTCTTGTTCTGTATAAGCGACGCTATGCGATTAAGA
TAGCAAGGCATATGAAAAGCATCATTTGTGTGATTGCCGATTTTGAACTGGAAAAATTTC
ATCATTTATGTAAAAAAATGGATAGTAAACTAGATAAAGGAAGGAGATAACAAACTTACA
AAAGAATACCATAATTTACCTAAAATTTTTAATCCAGAAGTTGAAGGAGTTGCAGTAGTA
AATGACTGCATTTAAGATAAATGAACAAGAGGAACCGATGGCTTGCGCTAGTCGAGAGGT
AATGGAAGAAGTTGGTTTTGATATTTCTGACAAAATTTGCAAAACACGTTTGATTCAATG
TTTTGTGAACGATACTTTAATTCGACTGTATATAATACGCGATGTTCCCATTGATTTCCC
GTTTGCTCCTAATACTCGAAACGAAATAGGGTGCGTACTTTTTTTTATGCTCCAAGATTT
GTTAAGTAATTGTATGAAGTGAGTGAGAATATTGCTTTTTTCCTAACTAAGAAAAAGAAA
AATTCCAATTTTCAGCAAGATTCAGTGGTTCTGTATTTGGGATTTACCGAAGGATCGAAA
CGACGTTGTCACGTGTGAGCGAATTGGTATGTCTCCAAGCAGTTTTTACACCGTGATTCC
GTTCGTCAAAGAGCTGCAAGCATATATTTCGAAATATAACACTCACAATAAGCTGAAACA
TAAGGTCAAGATGGTTTAGTTCTTATGTCTTAACCAAATTATATAATTTATTTTATCAAA
AAGATACTCTTTTCCCTCTGAAATGCTTTTAAATTGTAGCATTCATAATTGTATACGTTA
TGCAGGTTAAAAATGCTGCATAATATATACCTACTGTTATTTCTGCTATATGAATGATAT
TTATGTTTGTACGTATGTATGTATATCTGTGTGGAATGCTCGATTACCAAATTAGGAATG
GAAGGTTTTGAAGGAAAAAATTTAAGATATGAAAATTAAAAAAAAGAAACAACAAAAAAA
AAAAAAAAAAAAAAAAAGAAAAAGAAATAACAATGTTTAATCCTCCAATACTGAAAGCAA
TGCTCTACTGAAGGAGTGATATTTCATTTTTTTGCAGCCAGTGGATGCGATTAATATTAG
CACACGTTCATCAAGCGCGTTTAGTCCTGTGCAGCCTCAGCGTACGTTCCTTTTTTTTTT
TTTTTTTTTACAATAAATTTATAATTTTGATATGATCCAAAAAGCTTTCATTACTATTAC
TTTTATTGTGCCATCATTATTGCTACTTGCATTTTATTTATTTCAATTAGAGTTATAATT
AGCACATCTTTCAGTAAATGGAGAAGTCATTTTATTAACTTATCACACCGATATATTGAA
TTAATGACATGATGTTTGAAATTATCACAAGGCCTTTGTACGTAGAGTTTCATATCTGTC
ACTTATGTCAGTTTGATATTTGCATGCAGTTGTCTCATTATCAAAAGTACTATGGTATAA
CAATACCATTATCAACTGTGGTAATAATGACACCACACCATTGAGCATAATAACTGTCGC
AATAGTACCATATTGACAAAGAAATTTTTTTTTTTTGCTTGTGAACAATTTTATTATATA
GAGAAGAATGAGATGCTAGCACCAGCACTAAGTCCTTTATTCAACACGAAGACTACAGCA
AATATGAATCGTTCAGCGGTTTCTCATTATTCTTCCCAGCATGCATCACCAAATTCGGCA
TTTTTCAAGCCGCTGACATCATCAGCGCAACATATTTCATACACTGGTACCGCCTTTGTA
CAAATGTTATCCGGCGCTTCCTGTACGAGCATCGAAGGTAGATCTCATTAGGAATGTTGT
TTATACCATGTGTTTCTAGCTTTCAAACTTAGCCGAAGATTCATACGGTTTTACCAGAGT
GTTATTGTTTGAGACAGTATTAAAATGTAAACGAGAAAAGTAATTTGTTATAGTGGTGTT
AGTGGCTATATTCAGTTTTGTTAATAATTTTATTAATAAATTATGTGAAATCTCCAGAAA
GAGTGAAAATGAAAGAAGTAACAAGACCAGTGCCGACAGTTCCAAAAGCAGCTGTGCCAG
TACTTGGTCGTCCAGTATATGATGCATTCAGAGATGAAGGGGAAAAGAAGGTATGTAAAT
AAAAACATTAACAGGTTTTTTTTTTTTTTTTTGCTACAAATTTTTTTTTTCAGTATTTTG
AAACTTTTAGATTTGAGGGATTCTAAATTGTATGTTGGATGAAAATTTTGAGCACGATCA
GATATGTGCACTTGCACTCTGTTAATTTTTCAGTTGATAAGCTATATAAATTTAACTTTT
TACTTGTAGGAATACTATTACAAATTGTGGTTTAATACTCACTGCATCAAATACTTGCAT
TTAATTTCAGGTATTTTCATCCGTACAAGAATCACCACAGAAAACATCATTGAGTGGTAT
TCTTTATCAAGGAATTAGAAATGCGAAAGAAGTGACCAACTATCCGGTTGGTAGTAGCGT
ACAGAAAGCTGTGGAATGTGACAGTTGTTTCAGTTTGCCAGTAAATAAAGATATTTCACC
ACTGCCTCATAATCCAGGGTTTGCCTTTATTTGACTAATGAGATTGTAGAAAACTAGTTT
GGAAGAAGTTATCGGTGGTTTGTATTATTTGCTCGAGTTCAAATCGTTTTCTAAACTTGT
TGGCATTCTTTGTCAAATAAAATATTTTTCAGAGAGGACTTAATGAAGAATTATTTAAAA
GGAATTAGTGGTTGCTTGAAAAACCCAAAGGTTTCAACGACGAGTCATATGACTGAAGAC
AAACCACTCATTAATTTGTGCAATGCCTGGAAAAATTTCAAAGTTTGTGATTTTCTTTTT
GAATGTAACGTAAGATTTCAAGTGAGTACGATCTTCAGGAATAATAGTATTGAATTTTAA
TTTTTTTTTCCGTTTGTGGAATCATACCGTTTGTCTATTTATTGTGTGGTTTTGCATATT
TCTAAGTAAAAAGTAACAAGAATCAAAAACGGTATTGGTAAACTAGTATTTTTTTTTTGT
TTGAGTTAATGAACATTCTATGAATTTGATTGCATAAAGGGCGCGTGTATTTTCAGTTCG
ATATTTCGCGATTATTTTGAAAGTGTTGCTTATAAGAAGCTTAATTGTCAAATGTACAGC
TGGATTTTATTTTGACTTTAAATGAACCAAGAAAAAAAAAACCAAAAAATGCAGATCTTG
GAGGATGGTTTTAAAATAATGGAAATACCAATTAAAACATTCTTGCAGACTATGCGAATG
TTAAGACAAGTAATTCTTATTCTTAAATTGCCTTTGTAATAATATTAACTGGTGAGATAA
CACCAGCTTGTGTCTGAAAATTATCTGTAAATGCTAAGTCATTCATCAGAATTCACATCC
TCTAATTATATGTGTGTAAATTATAATAATGTTTTATCAAATATCCATAAATGTCAATTT
TATTTCTAACATATTTGATTTATTGATGTTAATCAACTTCAGTTTTCATCACTTGAAAAA
TTATTTCTGCAAGTTTCAATTTACTTTCAGACAAATATTTAAGACATATTCTAACATCTA
AAATGATTATTTACTTTATTATTTCAGACAAGTTTTACTCCAGATGTGCTGTATTCATAC
CCAAGATCTTTTATTTGCTACTGCTGTTTTTCCATATTGAAATTGTTCAATTTTGTTCAT
GTTATTATCGTTTCTTGAAGGATTATTTTTCGTGTCAATTGAACTTCGAGGGAAATTATT
CAGTATTTGATTTGGTGCATCTCTTCAACACTTCCAGTCATGTTCATCTACTTTTCAAAA
TATCGAGATATTTTTTCTTTTGACTGGTTAATTGTTTGGGTATATGTTACTCATTGTGTG
TTTATTGAGCATGTCATACT

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

This view and the transcript based sequence views are configurable by clicking on the "Configure this page" link in the left hand menu

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