WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
e.g. O. volvulus, PRJNA60051, WBGene00262434, Bma-eat-4, eat-4 or metallopeptidase

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Gene: F56A8.3 WBGene00010139

Description

Secreted protein [Source:UniProtKB/TrEMBL;Acc:O45574]

Location

Chromosome III: 13,256,878-13,262,905 forward strand.

INSDC Sequence ID

BX284603.4

About this gene

This gene has 5 transcripts (splice variants), 35 orthologues and is associated with 25 phenotypes.

Gene Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcripts

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Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
Download what you seeDownload whole table
Transcript IDbpProteinBiotypeUniProtRefSeq
F56A8.3a.11726444aa
 
Protein coding
Q95ZS5 -
F56A8.3a.21629444aa
 
Protein coding
Q95ZS5 -
F56A8.3b.21340254aa
 
Protein coding
O45574 -
F56A8.3b.11176254aa
 
Protein coding
O45574 -
F56A8.3b.3888254aa
 
Protein coding
O45574 -

Marked-up sequence

Download sequenceBLAST this sequence
Exons
  • F56A8.3 exons
  • All exons in this region
Variants
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▼▲
>chromosome:WBcel235:III:13256278:13263505:1
CAACCGAAAGGAGAGTTATAATTTTTTTTTCTTCAATTTTTGTGTTTTTTTTTCCTGTTT
ATAACCGAACTCGTCAAATTTGGCCATAATATTTTGATTTTATTTGTCATATATTTAGTT
ATTTAGGTTGAGTACAATTCGATTTTCAAGGTGCTATTTAATAATAATTATAAAGATGTT
TTTTTTTTTCAATTCAGTTTTTAAAATATGGTTTTCAACCCATAGTTTATATCAACTATC
AAAATATTCCATTATTTTTACTTACAAAACTGCAATTTGGAAAATTAATTTGGGCCCTAT
TGGGTTTATTTGTTTCAAAACCAATTCATAAATTTGAACTTCCCTCCAAAATGCCACAAC
GACGCTCCGAAATTCCGCATACGCATGTTGTTTATCGTAAATTCACACAAATTAGTTTGC
TGATTTTTCTTCCTATTTTCTTTTTTTTCCCCAAGTTCAGAGGTTATACATTTTATTCAA
AGCTTTCTCCAGATTTATTTTAATATTTTATCGTCTCTTCTTTCACATGCACACTTTTAC
GTTACCATCCCAACAATGCCGCGTGTCGAAAAATTTTTTTTCGCAATTTTTTAAATTTCT
AGGGAATTTCTCTGTGTGAAACTACAATGTCATCGCATAAATATAGTCTGACGGAGCTCA
AAAACTTGCAAGAAGATGATGAGTTGGATTTATCGGCAAGCGGAATTCAAGAATTCCCCA
ATGCAATCGTCCAACTGCCACGGTTGACGAAATTGGATCTGAGCTCAAATGCAATCACTT
TCTTGCCGGAATCTTTCTGCAAGATGACTAAGCTTATTCGGTAAGAGTTTTAAGCTGAAA
ATTTTTGTATATTTTAATTTAATTTTTCCCTTTTAAGGTTAGACTTCGGAAGTTGCCAGC
TTCATCATCTCCCTGATGGAATCGGGCTCTTGACAAGCTTGCAGCACTTGAACCTTTATA
ACAATCAAATAGAGGTATTTAAAAAATCGGCTAAGGCATGTAGAAATCAATCAATATTTT
CCAGGACTTGCCGCTCTCGTTCGCCAACTTAAAATCCTTGAAGTGGCTGGATTTGAAGAA
AAATCCGCTCAACTCGAAGCTCGCCGCCATCGCAGGAAACTGTGGGACTGATGCCGAGTG
TAAGCAGGCTGCCAAGCAAGTCGTCGACGTTTATATGGGCGAGCAGAAGAAGGCCATCGA
TAGCCTGAAAGCCCAGGAAGCTAAGCATAAGGCCAAGGTGCAGAAGGCCCAGGAAGAGGA
GAGAATGAAGAAGAATCAGGAGAAAAAGGAGAAGGCGGCGGCTAAAAAGGGTACATTTGC
AGGAAAAAAAACTATAGAAATATTCTGGAATTTGAGATATCAGAGCCCGTTTTCCATTAA
TAACGCATTTTCAGAATTTCCGGAAATTCTGCAGTTTCCTGGATGATTTTCTCAATTTTA
CAGGAAAAAATGATCAAATTTTGACATTTTCTTTAAATATGGCGAGATAACTAGCCATAA
TATAATTGTTAAAAAATTAGTTAAATTTTGCAAAAATTACATAATCATCCGTTTTTTCTT
TAACATGGTAAGAAATCTGGCTATTCTGGGAGAAATTCACTTTAAAAATACCAAAATTGG
CTTAAAAATCGATAGTTCAACCGAAAACTGTCAGAAAAGTACTTTTAAAAGTGACACAAA
AACTGAGAATTTTCAATTAATATATGTATTTGTATATTAATTGAAATTTCTCAGCTTTTG
TGTCATTTTTCTGGCAGTTTTCGGTGGAATTATCGATTTTTAAGCCAATTTTGATTTTTT
TAAAGGCAAATTTCCTCCAGACTGGCTAGTTTTATCGCCATGTTAAAGAAAAAACGGATG
ATTATGTAACTTTTGCAAATTTTAACTAATTTTTAAACAATTATATTATGTCAATTAATA
TTCACGAATATTATACTTTGAATACAGAGGATAAAATTGAAGGAGCAGGTGGCGGATAAA
GGCACACACACAGCATCTGTCAATTTCTTGCTCTCTCTCTCTCTCTTCCTTTTTCTCGTC
GTCATTTTCTATTCCTTTTGTGTTCAAATCCTTCCCCCTTTCACTATATACGAAGACGAC
GCCGCCTGTGAGCATCTGGAAAGAGCACGCAACTATTGGAGACATAGAGAAGCTCGAGAC
CTCCGTTTGTGGCAGACCCCACTCGTCGTCCTCCTCCTCAGCATTTTCTCATCGTTTTTG
ACGGCGATGCTTCTTCGTTGGAGGTGTCGGATTTCTTGTTATCACGTTGTTTTAAGCATG
TTTTCTGATGGAATATGAGTTCGCGTCGTAAAATGATTTTTTGCAAAAAACTGCAAATTC
GATTTGAAAATTCCCATTATTTGAAACAATTTCTGCAGGAGAACCACATTGACGATGAAT
CACTTTTCATTTTGGTTCCGTTGTGAGCTGATGGGAATTGAATCGTCGTATCGTAGTGAC
CACTGTGACTGAGATCGTGGCGAGACCCACTTTAAAATAACGTACAAATTTTTTTTCAAA
ATTACGATACCCATGTTCATTTTCTAATTTTTCATCTGGTTGAACTGCTAAGGTCGACTG
CACTACTTGCAGTCCGATTGCACAACTGACCACAACCAACCACGTACGTTTTGTGTGTGT
GTATGTGTATGTGAAAAATGAGACAGTGCACGGATCAATAGAGACGCAGACACTTTGAAA
AAGCGCCTGTCCGACCGGTGACCCCCCTCTCCTCTTTTCTCTGTTTAGTTTTTAAAACTA
AGCGATTGGATAGTCAGTGTTGTTATTGTGGCTGTTTTGCAGTTCGGAACGTGTGAATAC
CTGTTCTTCGCCGGTTTCCAGTTGATAATCCTTAGGTTTTTCTGCAGACATGGTATTTTT
AGATATAATATTTTTATTTTTAATACCTATATTTTTTCATGGAAAGTGAAATGGAGCTTC
TTTTGAGAATCTATTTTTTTTCATTTTCATTTTAAAAAAGCAGAATGCTGTATTTAGCCT
TGTAAATCTACGGGATCTCTGTTGCCTCGGCAGGTAATCTTGGCCATTTTTCAGAGCATT
TATTGGCGATGAGTGCTCTAGCAAGATATATCTATCTGTATCTAGCTAGATCTTGCTAGA
GCAGTCATCACCAATAAATGTTCTGCAAAAAGGTCAAGATTACCTGCAGAGACAACCTAG
ATCCCGTAGATTTACAAGGAAGTAGTGGCTGTCTTCCCATTATCTCATCAGCAATCTTCC
AATACCTTTCCAATTGATGACTGTCCAACTAGCAACATATCGGATTTACCTACCTACTTA
CCTGTTAGTACCTCACATCATGGATGGGCGGCAATCGCCGTCCGGCAAATTTTTTGGTCG
ATAAATTCGGCAATTCGACACAATTGCCGATTTGCCGGAAATGTTTAGAAGGATTTTTTT
TATCAGACGGAAATCCTTAAAATTGTGTCTTTTTGAAATTTTTTCCCATTTTCTTTAGAT
ATTTTCATAGAATTTTCTTACTTTTCAAAATAGATGTAAGAGCATTCATAGGATGCGTAG
AATTTTGCCGATTGAAATTGAAATTCTGAAATTTCCAAAAAAAAAATAGCGCAAAACCCC
CAATTTGCCAGTTTGCCGATTTGCCGAAAATTTTAATTTCGGGAATTTGCCGATTTGCCG
GAAATTTCAATTCTGAGAATGTGCCGATTTGCCGAAAATTTAAATTCCGGGAATTTGCCG
ATTTGCCGGAAATTTTCAATTTCGGCAATTTCCCGATTTGCCGGAAATTTTCAATTTCGG
CAATTTGCCGATTTGGCTGAAAAATATTCAGTGTTCAATTGACGCAAACTGTAATAATCG
AAAAGCTATTGGTATTTATATTCTCCAGTTGAAATAAATATATTTTGTTTGACCTACAAG
TTTTTGATCTACTGCCAGTCTTTCGAACCGCGTCTACCAAAAAGGAGCGGAACAAAAAAA
GATGATACAAATTCTTCCGTCACTTCTTTTCCCGTCGAACTTTTTCTTTTTGATTGACAC
TTTTTTTTTTGAAATTAGATTTTTGATCTTTTTAGTTGAAGAAATTCGAGTAGTACGCCG
GCTTTATCACAATATTTTTTCTTAACAAACGTCATATTTTTCTTAATATTTACTATAAAA
GTTGTAAAACCTACGTGGATGACCTCTGTGATACGTTTGCCTCGTTGTTTTTTTTGTTTG
TCGAATGTTCTTTGATTGTTGATGTCTTTTTTATTTATTTTTTCGCTCGCCTCTTACTTT
TTTTGTTGATAATTTTCTGTAGATCACCCAAATATTTACGTTTTTTTTTTCAGTTTTCTC
CTTCCCACTCAAACATTACGATTCCGAAGAACAGGATGGCTAGTAAGTTTTGGAAATTTT
TTAATGGACGGGCTCTGAGCAAATTCTTCAAAAATTTCAAAAAAAAATTGATTCCACACT
TTTAATCCAAAAATTTTCCAGAGAAAGACGCCAAGCAGCAGCGCGAAACTGTCAACGCCG
CTTCTCACAAGAACAACCACTCCCAGCAGCCAAAATCGCAGAAGAAGGAGCCGCATCCGA
AGAAGAATGAGCAGAAGAAGACGGAGCAGCCACGTGGATTCTTCAGAAAATGTAAAAAAA
TCTGAGAAATTTTTATATTTTTCGACATTTTCAAGCGAAACACCGAGCCGATATCCCTTT
GTGTAGATTTACGAGCTCGTGTACTATGCGTGGGCAAGATTTAACTGATTTTCTTTATAT
TTTAGATTGTCAATATTTGCCAATTTAACATGTTAAATGCAAAAAAAGTTAGCGAAAAAC
TGCAAAATCCTGCAAGAAAAATGGATTCAAGCTTGCCCGCGCGAGCTCGTAAATCTACAC
AAATCTTAAAGGGACATTGAGAAAACAATTTGTTTTCCAAGCCTACCAACGTCATATATT
TCTTATCAATGCTCGGTATGATTACGTTGAATAAGCAACCACGTTATTTTTCAGTATTTC
TAGCTTAAAACTGCAAAAAAAAACGTCTAGAATGCTGGAAAAAGGTATTCAAAATTCAGA
AAACCACATTTAAAAAAAAAGTAAAATTTTGATTTTTTGAATTACCGCGCTTGTGTCGCT
AAACTCCGCCCATAAAACCGTGCCGCACTTTTGTTTTTTTCAATTTCGACGCAAATTAAT
TGACACTTTTTTCGCTAAAAATTTGAAAAAACAGCACAAAAAAGCCGAAGTGCGGCACGG
TTATATGGGCGGAGTTTAGAGACAAAAGCGCGGTAATTCAAATGAGGAAAATTGGCAACA
ATTTCCATTCTTTCTCTATAGCTTTCTAAAAAATTCGAAGTTCGATGCACCATGAATTTT
AGTCAAATTTAATGATATTTTTTCAGTGTTCGGATTCGTCTGGTCATGCGTCTTCTACCT
GACAATCGTCGTCGCAACATCGAGCACCGTTGCAATCGCGCTCGACTGCAAGGGCCTCGG
ATCACCGATTCCTGGAACTGCTCCACTGTGCAAGGATCTTACATTGATGGCGACTGGAAA
CAAACCATCTGCCGCATTTGTTAAGAACACCAGAGCCGCCTACGGATCAGTCTTGCAAGG
ATATCAGTGAGAATTTGAAGAATCCCATAAAAATTTTGATAGTTTTTTTCAGCAACCAAG
TCAAGCCACACGTTGCTCCAGTTCAAGCCGCTGTCAGCAAAAAATGGAAGCAGTTTGCCA
AGTCTGATGTTGGAGGAAAAGTCGAAAAGATTGCTATGAATATTCACGCTTGGATTGTGG
ATAAATGGGTCAAAATTCAGAGATTCGTTCAACAGACGGTATATTCTTTGATACAGAGGT
TTAACAAATTATATAAATATCACAATTTTCAGTGGAACAACGTTGCGGCTTGGTGGAAGA
AGAACGGGCAAAAACAGTTTGGTCCAGCTCTTGAAGGATTCGTACTTGGAGTCAAGATGG
TTTTCCAAGTCGTTGCTGATGCTCTTCGCAGTGTTGGAGGTGCGGAATTTCGCAATTTTA
GCTTCAGAACTACGGTAGCCGGTCTCGAAGCGAATTTTGCAAGTACAGTAATCCTTATGG
GCGCACACATATTTGCACTTGAAAAAAATCGGACCTGCTACCGTATTTTCTGAGCAAAAA
TCGCAACTTATTAAAAATAATATCTCTAATTCCACTTTTTTCAGCTCTATTAGTCCATTT
CTTCGCTCGCGCCAAGACTTTCTTCGTTGCCTTCGCCGATGGTGGATTCAATGCTGCAAT
GAACACTTTGAACCACTAGAACCCACACATTTCATGATCAAGTCTCAATTCTTTGTTCTG
AAAGTGTTGTTTATTCTCCTCTCCTCTCTCTCCTCCTGCCCACTACGGTTATCGTCCCTT
CAAAAAATCGATAAATTTACTCGTAGTTATCCACGTTTCCTCGAATTTAGTTGATTTTTG
TAGATCATTTTTCTCTAAAAATCGAATCCCCCGCCCCGCCCCCGCCTCCACCTTTCCAAT
ATATTTTATTTATTTTCACTACGTCTTCTTACTGGTGTTTTTCCGTTTTTTTTGTTGTAG
TTGCGGTTTGTTTCGGATCGCACACAATTTGTTTCCTCAGTATTTCATTTAATTTATATA
TGAAAATAATTATATTCACTGGTTTTTCAATTGTTTTTGGTATTTTGTCCCTTGAACTAT
ATTATGTTACAGTTGGAAAATACGGGACCCGAGGTCTCGGCACGACAATTAAATTCGAAG
AAGTGTGCGCCTTGAAAGAGACTACTGCGGATTTTTTTTTGTTTTTCACAAGAATTTTTT
TAAAAAATTAAAAACGGGATATTTATATAATTCGATAGAAATTCTGGAACAACGAAATTT
CGAAACTACAGTACTCTTAAAAGGCGCACACCCCTTTGCAGTGAACGAAAATCCGTCGTT
TCGAGACCTGGCACAGTATTTTTTGCGGCAAAAATGACATAATGTGTTATAAATTCAGAT
TATTTTTGAATTAAACTATTTTAATTATTTAAAATAACATCTTTTTCAGACTGACAGTAC
ATGTAACACTCGATTTTCGCGATGGATCTCCTCAGGTTGCCCTATTTGGGGCAACAAAAA
ATTCTTCAATTAGCGGATCCCGCTTCAGTGTGAGTTTAATTATCGATTCTGCGAGTTTTA
TCGAAAAAATGCGAAAATGTAAAATTAAAAATAATCATTAAATTGGAAAACATCTTTATT
CGAAAAAAAATTAAACAAAAAAAATCAA

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

This view and the transcript based sequence views are configurable by clicking on the "Configure this page" link in the left hand menu

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