WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
Description

Secreted protein [Source:UniProtKB/TrEMBL;Acc:O45574]

About this transcript

This transcript has 9 exons and is annotated with 4 domains and features.

Gene
Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
Transcript IDbpProteinBiotypeUniProtRefSeq
F56A8.3a.11726444aa
 
Protein coding
Q95ZS5 -
F56A8.3a.21629444aa
 
Protein coding
Q95ZS5 -
F56A8.3b.21340254aa
 
Protein coding
O45574 -
F56A8.3b.11176254aa
 
Protein coding
O45574 -
F56A8.3b.3888254aa
 
Protein coding
O45574 -
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........caacaatgccgcgtgtcgaaaaattttttttcgcaattttttaaatttct
1F56A8.3b.2.e113,256,87813,257,097--220
AGGGAATTTCTCTGTGTGAAACTACAATGTCATCGCATAAATATAGTCTGACGGAGCTCA
AAAACTTGCAAGAAGATGATGAGTTGGATTTATCGGCAAGCGGAATTCAAGAATTCCCCA
ATGCAATCGTCCAACTGCCACGGTTGACGAAATTGGATCTGAGCTCAAATGCAATCACTT
TCTTGCCGGAATCTTTCTGCAAGATGACTAAGCTTATTCG                    
 Intron 1-213,257,09813,257,15457
gtaagagttttaagctgaaaatttt..........tttaatttaatttttcccttttaag
2F56A8.3b.2.e213,257,15513,257,251--97
GTTAGACTTCGGAAGTTGCCAGCTTCATCATCTCCCTGATGGAATCGGGCTCTTGACAAG
CTTGCAGCACTTGAACCTTTATAACAATCAAATAGAG                       
 Intron 2-313,257,25213,257,30150
gtatttaaaaaatcggctaaggcatgtagaaatcaatcaatattttccag          
3F56A8.3b.2.e313,257,30213,257,530--229
GACTTGCCGCTCTCGTTCGCCAACTTAAAATCCTTGAAGTGGCTGGATTTGAAGAAAAAT
CCGCTCAACTCGAAGCTCGCCGCCATCGCAGGAAACTGTGGGACTGATGCCGAGTGTAAG
CAGGCTGCCAAGCAAGTCGTCGACGTTTATATGGGCGAGCAGAAGAAGGCCATCGATAGC
CTGAAAGCCCAGGAAGCTAAGCATAAGGCCAAGGTGCAGAAGGCCCAGG           
 Intron 3-413,257,53113,260,6033,073
aagaggagagaatgaagaagaatca..........tttttttttcagttttctccttccc
4F56A8.3b.2.e413,260,60413,260,639-136
ACTCAAACATTACGATTCCGAAGAACAGGATGGCTA                        
 Intron 4-513,260,64013,260,73899
gtaagttttggaaattttttaatgg..........cacttttaatccaaaaattttccag
5F56A8.3a.1.e413,260,73913,260,88811150
AGAAAGACGCCAAGCAGCAGCGCGAAACTGTCAACGCCGCTTCTCACAAGAACAACCACT
CCCAGCAGCCAAAATCGCAGAAGAAGGAGCCGCATCCGAAGAAGAATGAGCAGAAGAAGA
CGGAGCAGCCACGTGGATTCTTCAGAAAAT                              
 Intron 5-613,260,88913,261,643755
gtaaaaaaatctgagaaatttttat..........gtcaaatttaatgatattttttcag
6F56A8.3a.1.e513,261,64413,261,86312220
TGTTCGGATTCGTCTGGTCATGCGTCTTCTACCTGACAATCGTCGTCGCAACATCGAGCA
CCGTTGCAATCGCGCTCGACTGCAAGGGCCTCGGATCACCGATTCCTGGAACTGCTCCAC
TGTGCAAGGATCTTACATTGATGGCGACTGGAAACAAACCATCTGCCGCATTTGTTAAGA
ACACCAGAGCCGCCTACGGATCAGTCTTGCAAGGATATCA                    
 Intron 6-713,261,86413,261,90946
gtgagaatttgaagaatcccataaaaattttgatagtttttttcag              
7F56A8.3a.1.e613,261,91013,262,07520166
CAACCAAGTCAAGCCACACGTTGCTCCAGTTCAAGCCGCTGTCAGCAAAAAATGGAAGCA
GTTTGCCAAGTCTGATGTTGGAGGAAAAGTCGAAAAGATTGCTATGAATATTCACGCTTG
GATTGTGGATAAATGGGTCAAAATTCAGAGATTCGTTCAACAGACG              
 Intron 7-813,262,07613,262,12954
gtatattctttgatacagaggttta..........attatataaatatcacaattttcag
8F56A8.3a.1.e713,262,13013,262,25601127
TGGAACAACGTTGCGGCTTGGTGGAAGAAGAACGGGCAAAAACAGTTTGGTCCAGCTCTT
GAAGGATTCGTACTTGGAGTCAAGATGGTTTTCCAAGTCGTTGCTGATGCTCTTCGCAGT
GTTGGAG                                                     
 Intron 8-913,262,25713,262,441185
gtgcggaatttcgcaattttagctt..........atatctctaattccacttttttcag
9F56A8.3b.2.e913,262,44213,262,5361095
CTCTATTAGTCCATTTCTTCGCTCGCGCCAAGACTTTCTTCGTTGCCTTCGCCGATGGTG
GATTCAATGCTGCAATGAACACTTTGAACCACTAG                         
3' downstream sequence
aacccacacatttcatgatcaagtctcaattctttgttctgaaagtgttg..........