WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
e.g. O. volvulus, PRJNA60051, WBGene00262434, Bma-eat-4, eat-4 or metallopeptidase

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Gene: CSP40.g8560

Location

Scaffold CSP40.scaffold00371: 866,654-869,419 reverse strand.

INSDC Sequence ID

LR543574.1

About this gene

This gene has 2 transcripts (splice variants), 223 orthologues and 3 paralogues.

Gene Type

Protein coding

Annotation Method

Gene models produced by BANG, as described by Stevens et al (2019)

Transcripts

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • Flags
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Transcript IDbpProteinBiotype
CSP40.g8560.t22004667aa
 
Protein coding
CSP40.g8560.t11998665aa
 
Protein coding

Transcript comparison

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CSP40.g8560         1 ATGTCTTCGTCCCCTCATCGGACTTCAACAACTCAGCAGCTGGCCGACTTGTCGTTGACTGAAGGCGAACATGATGAGGGCAAACCGCTTTCAACAGACTACCTTCAAGGGCGTGAGGGT    120
CSP40.g8560.t1      1 ATGTCTTCGTCCCCTCATCGGACTTCAACAACTCAGCAGCTGGCCGACTTGTCGTTGACTGAAGGCGAACATGATGAGGGCAAACCGCTTTCAACAGACTACCTTCAAGGGCGTGAGGGT    120
CSP40.g8560.t2      1 ATGTCTTCGTCCCCTCATCGGACTTCAACAACTCAGCAGCTGGCCGACTTGTCGTTGACTGAAGGCGAACATGATGAGGGCAAACCGCTTTCAACAGACTACCTTCAAGGGCGTGAGGGT    120

CSP40.g8560       121 CTTCTAGAGGTACTATAAACGAGATTTTTCTCATAAGAAAATATTGCGCGCAATATTTATAGTTTTCCTTGCAGTGAGTGTCGCATATCTAGAATTTCCACCTTTGATAAGTACTGTTAC    240
CSP40.g8560.t1    121 CTTCTAGAGGTACTATAAACGAGATTTTTCTCATAAGAAAATATTGCGCGCAATATTTATAGTTTTCCTTGCAGTGAGTGTCGCATATCTAGAATTTCCACCTTTGATAAGTACTGTTAC    240
CSP40.g8560.t2    121 CTTCTAGAGGTACTATAAACGAGATTTTTCTCATAAGAAAATATTGCGCGCAATATTTATAGTTTTCCTTGCAGTGAGTGTCGCATATCTAGAATTTCCACCTTTGATAAGTACTGTTAC    240

CSP40.g8560       241 TGCTTTCCAATGCATCAGTTTCTTTTTTCAAAAAATATTAATAGGATTCAATGTCCGCTGGTAGACTTTAAAGGCACATAAAGTTGACAAAAAAAAAACACGAATATCTCGCAGCGATTC    360
CSP40.g8560.t1    241 TGCTTTCCAATGCATCAGTTTCTTTTTTCAAAAAATATTAATAGGATTCAATGTCCGCTGGTAGACTTTAAAGGCACATAAAGTTGACAAAAAAAAAACACGAATATCTCGCAGCGATTC    360
CSP40.g8560.t2    241 TGCTTTCCAATGCATCAGTTTCTTTTTTCAAAAAATATTAATAGGATTCAATGTCCGCTGGTAGACTTTAAAGGCACATAAAGTTGACAAAAAAAAAACACGAATATCTCGCAGCGATTC    360

CSP40.g8560       361 GGAGAGTTGCCATTCAAATTTCCATTTCGCGCTTTTTTTCTGAAATATCAAAGCGGGACAGTATCAACCATCGTTTTTCTTGATGCTTTCTAACATCTTTGCCAGTTTGTTTTCGTTCAA    480
CSP40.g8560.t1    361 GGAGAGTTGCCATTCAAATTTCCATTTCGCGCTTTTTTTCTGAAATATCAAAGCGGGACAGTATCAACCATCGTTTTTCTTGATGCTTTCTAACATCTTTGCCAGTTTGTTTTCGTTCAA    480
CSP40.g8560.t2    361 GGAGAGTTGCCATTCAAATTTCCATTTCGCGCTTTTTTTCTGAAATATCAAAGCGGGACAGTATCAACCATCGTTTTTCTTGATGCTTTCTAACATCTTTGCCAGTTTGTTTTCGTTCAA    480

CSP40.g8560       481 TTCAAATATTTTCAGGAAGTCCTAAAATGGAACGAGCATGAACAGCTCGATTTCATGGATAAAATTGTTCATCGATTATCACATTATCAGTTGGGAAAAGTGGACACATTCATCAGACCA    600
CSP40.g8560.t1    481 TTCAAATATTTTCAGGAAGTCCTAAAATGGAACGAGCATGAACAGCTCGATTTCATGGATAAAATTGTTCATCGATTATCACATTATCAGTTGGGAAAAGTGGACACATTCATCAGACCA    600
CSP40.g8560.t2    481 TTCAAATATTTTCAGGAAGTCCTAAAATGGAACGAGCATGAACAGCTCGATTTCATGGATAAAATTGTTCATCGATTATCACATTATCAGTTGGGAAAAGTGGACACATTCATCAGACCA    600

CSP40.g8560       601 ATGCTACAGAGAGACTTTATAACCAATTTGCCCGGTGAGCTTTTACTAAATTTCACAACATCAAATTCTCGCAAATTCCAGGTCACCTCGTTGAACTGATCCTCTTCAATGTGAATTCAG    720
CSP40.g8560.t1    601 ATGCTACAGAGAGACTTTATAACCAATTTGCCCGGTGAGCTTTTACTAAATTTCACAACATCAAATTCTCGCAAATTCCAGGTCACCTCGTTGAACTGATCCTCTTCAATGTGAATTCAG    720
CSP40.g8560.t2    601 ATGCTACAGAGAGACTTTATAACCAATTTGCCCGGTGAGCTTTTACTAAATTTCACAACATCAAATTCTCGCAAATTCCAGGTCACCTCGTTGAACTGATCCTCTTCAATGTGAATTCAG    720

CSP40.g8560       721 ATTCTCTGAAAGCATGCGAAGAGGTCAGCACAAACTGGAGATGTGCACTCGCTCGTGGGCAACATTGGAAGAAACTGATCGAAAAGAATGTGCGAAGTGACTCTCTTTGGCATGGACTTT    840
CSP40.g8560.t1    721 ATTCTCTGAAAGCATGCGAAGAGGTCAGCACAAACTGGAGATGTGCACTCGCTCGTGGGCAACATTGGAAGAAACTGATCGAAAAGAATGTGCGAAGTGACTCTCTTTGGCATGGACTTT    840
CSP40.g8560.t2    721 ATTCTCTGAAAGCATGCGAAGAGGTCAGCACAAACTGGAGATGTGCACTCGCTCGTGGGCAACATTGGAAGAAACTGATCGAAAAGAATGTGCGAAGTGACTCTCTTTGGCATGGACTTT    840

CSP40.g8560       841 CAGAGAAACGACATTGGTTGGTTTTATCAAATAATATTGGTGAAAGACAGTTTAATCCCAGGGACAAGTTCCTCAACATCAGCCGAGAAATGTCGGTTCTTCGAATCTGCGAGAAGTTCG    960
CSP40.g8560.t1    841 CAGAGAAACGACATTGGTTGGTTTTATCAAATAATATTGGTGAAAGACAGTTTAATCCCAGGGACAAGTTCCTCAACATCAGCCGAGAAATGTCGGTTCTTCGAATCTGCGAGAAGTTCG    960
CSP40.g8560.t2    841 CAGAGAAACGACATTGGTTGGTTTTATCAAATAATATTGGTGAAAGACAGTTTAATCCCAGGGACAAGTTCCTCAACATCAGCCGAGAAATGTCGGTTCTTCGAATCTGCGAGAAGTTCG    960

CSP40.g8560       961 GTTATGATCCGAACACCAAGCGTGAAAAGATCGATCAACTCATCCTGATGCATGTCTTCTACAGCAAACTATATCCAAAGATCATTAGAGATATCCACAACATTGACAGTAACTGGAAGC   1080
CSP40.g8560.t1    961 GTTATGATCCGAACACCAAGCGTGAAAAGATCGATCAACTCATCCTGATGCATGTCTTCTACAGCAAACTATATCCAAAGATCATTAGAGATATCCACAACATTGACAGTAACTGGAAGC   1080
CSP40.g8560.t2    961 GTTATGATCCGAACACCAAGCGTGAAAAGATCGATCAACTCATCCTGATGCATGTCTTCTACAGCAAACTATATCCAAAGATCATTAGAGATATCCACAACATTGACAGTAACTGGAAGC   1080

CSP40.g8560      1081 GTGGAAACTACAAGTTAACCCGTATCAATTGCCAGTCAGAAAACAGCAAAGGAGTTTATTGCCTGCAGTATGATGATGATAAAATAGTGTCTGGATTGAGAGACAACACTATTAAGGTAC   1200
CSP40.g8560.t1   1081 GTGGAAACTACAAGTTAACCCGTATCAATTGCCAGTCAGAAAACAGCAAAGGAGTTTATTGCCTGCAGTATGATGATGATAAAATAGTGTCTGGATTGAGAGACAACACTATTAAGGTAC   1200
CSP40.g8560.t2   1081 GTGGAAACTACAAGTTAACCCGTATCAATTGCCAGTCAGAAAACAGCAAAGGAGTTTATTGCCTGCAGTATGATGATGATAAAATAGTGTCTGGATTGAGAGACAACACTATTAAGGTAC   1200

CSP40.g8560      1201 TAGAAATTACAATGACCGTATTCAATATCGAAAAAATTTCAGATCTGGAATCGAAAAGACTACACCTGTAGTCGAACTCTCTCCGGACACACTGGATCAGTTCTATGTCTACAGTATGAC   1320
CSP40.g8560.t1   1201 TAGAAATTACAATGACCGTATTCAATATCGAAAAAATTTCAGATCTGGAATCGAAAAGACTACACCTGTAGTCGAACTCTCTCCGGACACACTGGATCAGTTCTATGTCTACAGTATGAC   1320
CSP40.g8560.t2   1201 TAGAAATTACAATGACCGTATTCAATATCGAAAAAATTTCAGATCTGGAATCGAAAAGACTACACCTGTAGTCGAACTCTCTCCGGACACACTGGATCAGTTCTATGTCTACAGTATGAC   1320

CSP40.g8560      1321 AACCGAGTTATCATTTCGGGATCGTCGGATGCGACTGTTCGTGTATGGGACGTTGCTACTGGCGAGTGCATCAAAACATTGATCCATCACTGTGAAGCTGTGCTTCATCTTCGCTTCGCT   1440
CSP40.g8560.t1   1321 AACCGAGTTATCATTTCGGGATCGTCGGATGCGACTGTTCGTGTATGGGACGTTGCTACTGGCGAGTGCATCAAAACATTGATCCATCACTGTGAAGCTGTGCTTCATCTTCGCTTCGCT   1440
CSP40.g8560.t2   1321 AACCGAGTTATCATTTCGGGATCGTCGGATGCGACTGTTCGTGTATGGGACGTTGCTACTGGCGAGTGCATCAAAACATTGATCCATCACTGTGAAGCTGTGCTTCATCTTCGCTTCGCT   1440

CSP40.g8560      1441 AATGGAATCATGGTTACGTGCTCCAAAGACAGATCCATTGCTGTCTGGGATATGGTGTCACCACGTGATATCACTATTCGAAGAGTGCTCGTGGGACACAGAGCAGCAGTCAATGTTGTG   1560
CSP40.g8560.t1   1441 AATGGAATCATGGTTACGTGCTCCAAAGACAGATCCATTGCTGTCTGGGATATGGTGTCACCACGTGATATCACTATTCGAAGAGTGCTCGTGGGACACAGAGCAGCAGTCAATGTTGTG   1560
CSP40.g8560.t2   1441 AATGGAATCATGGTTACGTGCTCCAAAGACAGATCCATTGCTGTCTGGGATATGGTGTCACCACGTGATATCACTATTCGAAGAGTGCTCGTGGGACACAGAGCAGCAGTCAATGTTGTG   1560

CSP40.g8560      1561 GACTTCGATGATAGGTACATAGTCAGTGCGAGTGGAGATAGAACTATTAAGGTGAGAGCAGTTCCCGTAATGATGAACGCCAAATATCAATATTCAGGTCTGGTCCATGGATACATTGGA   1680
CSP40.g8560.t1   1561 GACTTCGATGATAGGTACATAGTCAGTGCGAGTGGAGATAGAACTATTAAGGTGAGAGCAGTTCCCGTAATGATGAACGCCAAATATCAATATTCAGGTCTGGTCCATGGATACATTGGA   1680
CSP40.g8560.t2   1561 GACTTCGATGATAGGTACATAGTCAGTGCGAGTGGAGATAGAACTATTAAGGTGAGAGCAGTTCCCGTAATGATGAACGCCAAATATCAATATTCAGGTCTGGTCCATGGATACATTGGA   1680

CSP40.g8560      1681 ATTTGTTCGAACTCTTGCGGGTCATCGACGTGGAATCGCTTGTCTTCAATACCGTGGTCGTCTTGTGGTGTCCGGATCCAGTGATAACACTATCCGTCTCTGGGATATTCACTCTGGAGT   1800
CSP40.g8560.t1   1681 ATTTGTTCGAACTCTTGCGGGTCATCGACGTGGAATCGCTTGTCTTCAATACCGTGGTCGTCTTGTGGTGTCCGGATCCAGTGATAACACTATCCGTCTCTGGGATATTCACTCTGGAGT   1800
CSP40.g8560.t2   1681 ATTTGTTCGAACTCTTGCGGGTCATCGACGTGGAATCGCTTGTCTTCAATACCGTGGTCGTCTTGTGGTGTCCGGATCCAGTGATAACACTATCCGTCTCTGGGATATTCACTCTGGAGT   1800

CSP40.g8560      1801 TTGCCTTCGTGTTCTCGAAGGGCACGAAGAGTTGGTCAGATGCATTCGATTCGATGAGAAGCGGATAGTATCTGGAGCTTACGACGGAAAAATCAAAGTGTGGGATCTCCAAGCTGCTCT   1920
CSP40.g8560.t1   1801 TTGCCTTCGTGTTCTCGAAGGGCACGAAGAGTTGGTCAGATGCATTCGATTCGATGAGAAGCGGATAGTATCTGGAGCTTACGACGGAAAAATCAAAGTGTGGGATCTCCAAGCTGCTCT   1920
CSP40.g8560.t2   1801 TTGCCTTCGTGTTCTCGAAGGGCACGAAGAGTTGGTCAGATGCATTCGATTCGATGAGAAGCGGATAGTATCTGGAGCTTACGACGGAAAAATCAAAGTGTGGGATCTCCAAGCTGCTCT   1920

CSP40.g8560      1921 CGATCCTCGTGCACTGTCTTCCGAAATCTGCTTGTGCTCACTGAATCAACACACTGGAAGAGTCTTCCGTTTGCAATTCGACGATTTTCAAATTGTCTCCTCATCACATGATGACACAAT   2040
CSP40.g8560.t1   1921 CGATCCTCGTGCACTGTCTTCCGAAATCTGCTTGTGCTCACTGAATCAACACACTGGAAGAGTCTTCCGTTTGCAATTCGACGATTTTCAAATTGTCTCCTCATCACATGATGACACAAT   2040
CSP40.g8560.t2   1921 CGATCCTCGTGCACTGTCTTCCGAAATCTGCTTGTGCTCACTGAATCAACACACTGGAAGAGTCTTCCGTTTGCAATTCGACGATTTTCAAATTGTCTCCTCATCACATGATGACACAAT   2040

CSP40.g8560      2041 TCTCGTCTGGGACTTCTTGGACGCACAAGCAATTGGACCGCAAAATGCTCCGGGCAGAGTAAGTATGACATGTGGAAAACATCTGGGAGAGTCCAACGACGGGACAATGAATTGTACTTT   2160
CSP40.g8560.t1   2041 TCTCGTCTGGGACTTCTTGGACGCACAAGCAATTGGACCGCAAAATGCTCCGGGCAGAGTAAGTATGACATGTGGAAAACATCTGGGAGAGTCCAACGACGGGACAATGAATTGTACTTT   2160
CSP40.g8560.t2   2041 TCTCGTCTGGGACTTCTTGGACGCACAAGCAATTGGACCGCAAAATGCTCCGGGCAGAGTAAGTATGACATGTGGAAAACATCTGGGAGAGTCCAACGACGGGACAATGAATTGTACTTT   2160

CSP40.g8560      2161 TGTGTAATGACACTGAGAGAAGAAAAATTGGAAGAGAGTATATGAATGGAGGAATTCAATGTGAAGAGACTATTGAAGCATTTTTTCCAGTTTCAGGCAGTCCTTCCCGAACTTCCGAAT   2280
CSP40.g8560.t1   2161 TGTGTAATGACACTGAGAGAAGAAAAATTGGAAGAGAGTATATGAATGGAGGAATTCAATGTGAAGAGACTATTGAAGCATTTTTTCCAGTTTCAGGCAGTCCTTCCCGAACTTCCGAAT   2280
CSP40.g8560.t2   2161 TGTGTAATGACACTGAGAGAAGAAAAATTGGAAGAGAGTATATGAATGGAGGAATTCAATGTGAAGAGACTATTGAAGCATTTTTTCCAGTTTCAGGCAGTCCTTCCCGAACTTCCGAAT   2280

CSP40.g8560      2281 CAAGCCGCTGTTGCTCGCGCTCAGATGCTCTTTGAAATGGCTGCGAGACGTGAAATAGAACGTCGTGACCGTGAAGTTGTCGAGGAACAAGCAGCTCCAAGACCTCGAAGACATCATCAT   2400
CSP40.g8560.t1   2281 CAAGCCGCTGTTGCTCGCGCTCAGATGCTCTTTGAAATGGCTGCGAGACGTGAAATAGAACGTCGTGACCGTGAAGTTGTCGAGGAACAAGCAGCTCCAAGACCTCGAAGACATCATCAT   2400
CSP40.g8560.t2   2281 CAAGCCGCTGTTGCTCGCGCTCAGATGCTCTTTGAAATGGCTGCGAGACGTGAAATAGAACGTCGTGACCGTGAAGTTGTCGAGGAACAAGCAGCTCCAAGACCTCGAAGACATCATCAT   2400

CSP40.g8560      2401 CGTCCACCGAATCATCCAGATGTAGCTCTGTTAGTAGCTATAGGAGGAGCAGTGGCCAGAGATGCTGCCGGAGATAACGACGGATCATCATCAGAAGATGAAGTTGATCGAGTGGACAAT   2520
CSP40.g8560.t1   2401 CGTCCACCGAATCATCCAGATGTAGCTCTGTTAGTAGCTATAGGAGGAGCAGTGGCCAGAGATGCTGCCGGAGATAACGACGGATCATCATCAGAAGATGAAGTTGATCGAGTGGACAAT   2520
CSP40.g8560.t2   2401 CGTCCACCGAATCATCCAGATGTAGCTCTGTTAGTAGCTATAGGAGGAGCAGTGGCCAGAGATGCTGCCGGAGATAACGACGGATCATCATCAGAAGATGAAGTTGATCGAGTGGACAAT   2520

CSP40.g8560      2521 CCCGATGCAGCCGGTCCAGCTCCACAAGCTCCCCACAATCAAAACCACAGAAGGAGACAACCAAGGCCCGGTCTTCCGGATAGACTTGTTGTAAGTTAAACTGGTGTTGATACGTTTGAA   2640
CSP40.g8560.t1   2521 CCCGATGCAGCCGGTCCAGCTCCACAAGCTCCCCACAATCAAAACCACAGAAGGAGACAACCAAGGCCCGGTCTTCCGGATAGACTTGTTGTAAGTTAAACTGGTGTTGATACGTTTGAA   2640
CSP40.g8560.t2   2521 CCCGATGCAGCCGGTCCAGCTCCACAAGCTCCCCACAATCAAAACCACAGAAGGAGACAACCAAGGCCCGGTCTTCCGGATAGACTTGTTGTAAGTTAAACTGGTGTTGATACGTTTGAA   2640

CSP40.g8560      2641 CTGTTGATTTCTCAATTTGAATAGTTTCAGCAAGAAATGGCCGCCTTTGACAACCGCCGTGTCCGTCGAGGGGATCTAGGAGGAGGCGGAGATGTAGACGAAGAGATGCCCGATGGTGCT   2760
CSP40.g8560.t1   2641 CTGTTGATTTCTCAATTTGAATAGTTTCAGCAAGAAATGGCCGCCTTTGACAACCGCCGTGTCCGTCGAGGGGATCTAGGAGGAGGCGGAGATGTAGACGAAGAGATGCCCGATGGTGCT   2760
CSP40.g8560.t2   2641 CTGTTGATTTCTCAATTTGAATAGTTTCAGCAAGAAATGGCCGCCTTTGACAACCGCCGTGTCCGTCGAGGGGATCTAGGAGGAGGCGGAGATGTAGACGAAGAGATGCCCGATGGTGCT   2760

CSP40.g8560      2761 CCATGA                                                                                                                     2766
CSP40.g8560.t1   2761 CCATGA                                                                                                                     2766
CSP40.g8560.t2   2761 CCATGA                                                                                                                     2766

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