WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
Description

Alpha actinin sarcomeric [Source:UniProtKB/TrEMBL;Acc:A0A068WCI4]

Location
INSDC Sequence ID
About this gene

This gene has 1 transcript (splice variant), 70 orthologues and 12 paralogues.

Gene Type

Protein coding

Annotation Method

Gene models produced by University of Melbourne

Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
Transcript IDbpProteinBiotypeUniProt
ECG_009672814937aa
 
Protein coding
A0A068WCI4 W6UY26
Exons
  • EGR_01584 exons
  • All exons in this region
Variants
  • loading
>scaffold:ASM2155672v1:1:12308112:12315746:-1
ACTAGATGAATTTGGTTTATTAATTAATTCATAGCGCCGCTTTTAGTTGAAAATGGGCAA
AATACACAAGCATGTCCAAGCTGCAATCGCTTTGCAAAATGATGTTTTATTCCGAGTTAC
TTTGGAGTCTGGATTGTTGCGACGATGCAGCAAATAATTTGCAGATACAATGCTAAATTC
GATGTAATTTTCAACTACATAGCAACTGTACCTCTGCATTGGAAAACTTTAGGGTTTTGA
AAATGTTTAGAGCCTAGCAAGTATCAATTAAATATATATCAGTTTCCGTTTCCTGCCATT
GAAGACCTTGTATCGTGAGCACACTTTTGAACATTATGTAATTTGTACGTAATGTAAGGT
TCTCTTTGTTTGATCTGCAAGAAACGCGTTTGGATAAATTTCCACGTGTACTCATAACGC
CTACCAAAAGTATTTAAATACCTTAATTTCCATTAGGATAACATAAATGATAATTATGCT
GAATATTCCTTACGTAATATTGTTAGTGAAGGATATTAATTGAGTAACCTTGAGAGGAAC
GTTGGGTGTTTAAGTTGTTTGGACTTGAGCGCTACCAGCAATCACTAAACTTCTCGAGGG
ATGTCTGATGAAGCTTGGAGTCTAAAAGCACACCAACAGAAATCCATTTTTGAATTCGAA
GGGTATGCCAATGACGATGACGATGAAGAAATACCAGAAAGGGAAACACCGATTGATCCA
ATTTGGGAAAAACAACAGAAGAAGGTTTCTGCTTCCTTCCCATTTTATTCTTTAGACATT
CACTGCCTGGTGCAACCTTCATTTGAAGAAAAAGAATGCAGAAATAACCATTATAGAAGA
GGATTTTCGCAATGGGCTCAATCTACTATTGCTCTTGGAAGCCATTTCTGGTGAACAGTT
ATCTCCCCCTGAGCGTGGCAAACTTCGTGTTCATAAAATATTAAACGTCAATAAAGCACT
TGACTTTATTCAGAAGAAAGGTGTCAAATTAGTTGGAATTGCAGCTGAAGGTTTTTTTCC
CCTTTCTACTCCTTTATTTTCGTAGAAATCGTTGATGGAAATGTTAAGATGACACTTGGC
ATGATATGGACCATTATCTTAAGATTCGCTATTCAAGATATTCAAATTGAAAGTATTTTT
TAATTTGGTTACTATTTTGCATGTCTAGACTGCTCTGCTAATGACGGTCTTCTTCTTTGG
TGCCAGCGTTCCACAGAGCCCTATCCTGAGGTTAATGTGAAGAACTTTAATACTAGGTAT
TTCACCCTCGCGGCATAATTTGCTGTAGTTTTAAAGATGGGAAGGCATTCTGTGCTATCA
TCAATCGGTATCGTCCTGATCTGCTCAACTTTAATGATGTTGCCAAAGCGCCTGCTCGTT
ATGCGCTTACGAAGGCATTTGACGTCGCGGAGGAGAGTCTCAGCATCCCAAAAATGCTCG
ACGTTGATGGTTTTTGCGTTATAATGGTTTATACTTCTTAGATATGATTGAATCTGTCAA
ACCCGATGATCGATCTGTCATTACATATGTCTCATGCTTCTTCCACTTGTTTGCTGAGGC
CGAGAAGGTAAACCACTTTTGTTCGTCTTTATCCTGCCGTACAGACTGGCGCTGCTGCTA
CTCGTATCAAAAAGGCCGTGGAAATTAGCCAAATGAGCGATCAGCTGTGTGACTCCTACA
ATCGTCTTTTCACTGATTTGAAGACGTGGATTATAAAGAAGAAGGCTGATTTTGAGGTGA
GTATTACTTTTACTTTTGTCAACACAGTTAATGATCAATATTCAATTTTTTAGCACCGGA
AGCCAGTTCTGAATTTGGAGGATGTCAATAAGAGCATAGAAGGGCTACGCCAATATCAAA
CTGAGGAAAAACCAGCTAAAATCGAGGAAAAGTCCCGTCTTGAGACCACATTCCGCACCC
TTCAAACACGTTTGCGTCTCAACAATCGACCACCTTATCTGCCATCTGACGGAATGTTGA
TAGCCGATATTTTAATTCTTTGGAAGGAATTAGAAATTTGTGAGAAAAATTACGAGGTAT
GTTTCCTGTGGTGTTACTTTTTCTGTTTTTACGCCTGTGATGCTGAGGTATAAACGTTTC
CTTGTTTTAGGAATGGCTCATGGGAGAGAGGAAGCGAACCACCACCCTGGCCTACTGGTT
ATCACGTTTCGAGGTCAGGTGCAAGACTTTCGAGGCCTGGGCGAGTGGCAAATCGGACTA
CCTACAGTCCTCTGACTACACTACGTGCACCGTCGCAGAAGTCCGTCCTATGCTGAAGAA
GCACGAAGCTTTCGTCTCCGATCTAATGGCCCAGCAGGATCGTGTCGAGCGCATTGAGTC
TATCGCTCAAGAAATTAGGTCGTTTGTCTTACCACATATTTCGAGATTTCATGTTTCACC
GGCTTTCTGTTTTGCGAAATAGTCCTCTTGTGATGGGTGGAAAATCACGCATAGTGCTTT
TATTGTGTCATCTTCGCTTTCTATATGCTGTTGTACGAGCAAAACTACTTTTGGCGCTCT
ATCACGTGAATAAGCATTTACCGGGTTTGGTGCTGTAAATAATTCCACGAAAGTGCTTGG
TATGCACTGGTTCCATATTTTGTTCGCGTACTCTTTTGCCGGCGCGTTTGTATACCTCAG
ATGTTTACTTTGATCTTTGCATTTCAGGAACCTTGGCTATACGGATATGCCTTCGATTGA
CAGTAGGTGTGCTCAAATTAAGAGCAGTTGGGACTCTCTTAAGGCACTTTCTGATAAACG
TCATCAAAATCTTTCGGTGCGTTCTAATGTTTTGCGACTGTTTTGTGTTGCCCAGCTGAG
CGCTTTAAACGTTTATCCTTTTTTGTAAACTAAAGTCGTAAATTCAGGTTTTCTTTACAC
TTCAATTATTTCCTTATCGCTGTCTTGTCCGCGTCTTTTGTGTTAAAGCCCCAAATTTAT
GCGACAGGACTGCCTCTCGTTAAGTCCTAGCTTTCCTCCTAAAGACTACACTCCAAGTTA
CTAACTCCACTTTTCTTGTAAGGATGCGCAATCCGTTTTGGAAAAAATTGATGCTAAACA
CCTTGAGATTGCAAAGCTCTCTGCTGTGAGTCTACCTTTTCCTAACTTGTTTTCATTGCC
AATTTCAGAACGGCATTGTTAGTATCCATTTTTTTGTTTTAGCCGTTCCATAATTGGATG
CAGCAAGCGGAGGAGGACTTACTTGACAAATTTATAGCTCAATCCACCGCCGATGTTGAG
GTAGGCCTTTCTGCCGTACTACAGGTCATTCTTGCTGTCTACTTTTTCAACTGTGGCCAA
AGGAAATTCCCTCAAGTTTGGGTTCGTAGTCCCATTGTTGCCGTCGATTTTGCCCTACTG
GGCTTGTGTGCATGTGGAGAACGTCTGAGCACTGATTTATTTGGCTGTGCTTCATCCATC
TACAACTTTTCACTCTTTTCCCGCTAAACTCTCTCTCGCGTCCCGCTAGGGCTTTGCGTT
TGGCTATATTAAGGCAATAGCGCTTCATTCTACCGAGCCTCTTGTTGAGTGTACCAAGTA
TATATTCTGTTGTTCTGTTGAATCTTTTAACGCATGCGGTTTCGACGTCCCCGCGAAGGC
CTTCTTTTCAGGCGCCGACCCTTGCGGTCATGCGAATCCGTGGCGTGAACCGTTCTTGAT
GTGTTGACCTAAATTTATGTTTGATGCGTACAATTTCTGTGTTAGGTTTTTATTTCTGAC
CACGCACTCAATGGCCTACTTTAGCCGCTTTGCGCAAACACTCACTTTGCTGCAATTCGC
AGACTTATGTTTGTGATAAAGGCCAATATAATTAAGCAGTACTACCACACTCTTAACTTT
CGTGCTTTCCAGAAACTGATTAACGCTCATGCTGAATATGAGAAGTCGTCGAAGGAGAAG
GCGAAAGAATACGGGAAGATCAGGGACTTGGAGGTTGAGATTGAGGGTCTCTGCAAGCAA
ATTAACAGAGAATCAATTGTGAACCCCTACACTAACGTCACCACGTCGGTAAGCCCGATG
ATTTGTCTTGTCTCCAAGATTGTGGTCGTGCCTGCATTAAAGTTGCACACATGATCGCTT
CTCTTCTACAGCAACTAGTACTAGTGCTTCGGATTATCTTACTCGCTCAAGTTCTTTTAA
TTCACCGAGGCATATCATAATACCTCAGACCAACTGAATTATTACTTGAATAATCACTTG
TTACTTGAATCCTCCAGTATTTTTTTTTTCGAAGTACCTTGAATTAGACTCGATTTCAGT
AGTTATTGATATCAAAGGGAAAGTCGTCTTATAGGTGTAACCCACCTTTCTTTTTCTTAT
TCATTGGATGCTACCGTTCCAGCAATAACATATTCTCGCTAGTGTGTGTGCACATTTACT
GGGTTAATTTGCAATGCTTAGTAGGCCATTTGCTTTTCTGGTTGCCATATATAGCCATGT
CCACTTGAGTTATGCGTAGCCCATGTGAATGGTGCTCTCATTGTAGATGCTATTTTTATG
ACTTCCCGCTCATCGAACCCGATGTTCAGCTGAAGATGCTTTTACAAGTATTTCTGCAAA
GGGTTAGGCACAAATCCTATATATTCATATGTAAATACTAATAATTAGTTGCTGACTTCT
CATTGTCGTTGAACGATGGAGCCTAAACAAGTTAAATCCCAAGTGGAGCATATGTTCCCG
TGTTTTCAATATGGTTGCGTTGGCCCTTTGGTATGTCTTTATTTGAGTAATTAATCCCAC
CCTGTGCGTTTTTCAGCATGCATTTCTTTTTGGCAGCAGAAAAAACGTAAAGTAGCTAGG
AATCTGCACTCTTTTAATGCTTTTTGATTATGTGAAATTCCGCAGCCAAATTTATCTATT
CAACGTTTTGATATGGTGGAGTAGTTATTGAATGGTTGGGTGCCTGTAATCCTTTTCATT
GCGGATTGCAAATGTGCCACTCATTAATTTAAGAAATTATGACCGAAATATAGATAGCAT
AAAACTGCCTATTCTGCGGGGCTGGACTACTAGTACTAATGCTTCCTCCTGTGCAGAGGT
TGCACGAGCAATGGAAGACGTTACAGGAGCTGACCGATCAACGCAGGAAGGAGTTGGAAG
AGGAGAAGAAACATCAATTGGTGTGTGATCAGGTGCGGAGGCGATTCATTCAATTGGCGA
CAGAGCTCAATGGCTGGCTTGAGCAGACCCAGGGGCGTCTGAACAATGTAGGACTCGGAG
AAGCCTCCCTCGAAGAGCAGGTCAAACTTCTCACCAATCTGGATGGAGAATTGGAAGCCC
AACGGCCCAAGCTCAGTGAACTAGAAGATTGCCATCAGGTAGTGGGGTTTGGAATCTTGA
TTTACCGTCCAAATTATTCATTTATTTAATCTATCGGTCATACTGCCAATTCTCACAGCA
TCTGCAAGATGCGTATGGGGATCTTGACTTCCCTGTCCCGATGGCAACTCTGCGTTCTGT
TTGGAATCAACTGTCAACGGGTCTGAAATACACGAGGAATGAGATCGAAAACCAGATATT
GACTCGTGACTCCAAGGGCTTGAGCAAGTCCCAGCTGGACGACCTGCGCCGCTGTTTCAA
CCACTTCGACAAAGACCATACCGGTCGCCTTGAGTGTCCTGAATTTAAAGCCTGCCTCGT
CTCTGTCGGACATTCCATCGTGGCCGAGGCCAAGAAGCAGGTAGGCCAAATGTCAGCTGA
CGGAGTGAATCAGAGGGAGAGAGGGTTCTGTCTAATGCTCTACTTTAAACGTGCATAAAT
GTTTCATTTTATCGTATAGCAAAAAGCACAATTTATTTGGGTGAAATAATTTGATTTGGT
ACTTAGTAGATTATTAGATGTTTATTTAATCTGTAGTAAGCTTGGCATTTTCGTCGGGTT
GAGAAATCTTGCTGTAATTACATTGTTGCTTGCCCTATCTCATTATCTTCATCCTTTTAT
TCAACAGCGGAAGACCTCCGTAGACACGGTACATTTGCATGCCATTTTGTAGCCCTGACT
ACTAATTCTCTAAGCGTTGTCTTCAATTGCCTTTTGGTTGCTCGGGCCGACTTTTCTATG
TACCCAACGCCTTATTTACTTCTAACCGCCCTTTTGTTACATTGTGCTGATGTTTTGCGG
TTGTAGCATCTTGTGTCGTCTATTTCGTGACTTTTTCCACTGCGTGTTGAAGACTGCTGG
TTGCAGCATGTCATCTATCCGACCGTGCGAAATAACCACAATGTCCATACCCGGATTTCA
TACAGTTACTCTGTTTGTGTGTGCGTGTTATTAGCGTGGGAAACTTACTCAACTAACTCC
TTACCGAATTCATTCTGCCTTTTGATTGATTCATCCCCCACTGCATCCACAGGCTGATAA
GTTGATGGTAATTTTTTGCGCGTGCTAACCAGCTCCCGCGTGCATAATCGGAAAGCGTCC
TTTAGATTTCGATGTGGTGTGCCCACCTTGCTTCCTGCCTTGCCTCAAGCTTTATCACCG
ATTTAGCGTTTAACTTGGCTTCTTTTGTGCTTTAGTCTGATGAGGATATTTTAAAGCTAA
TGAAACAGCTCGATCCCAACTCAAACGGCTCAATTGCGTTCGATGTCTTCGTGGACTACA
TGACTCGTGAGCTTACCGACTTGGATACGTCCGACCAGCTGCTTCAGTCTTTCCGCACGA
TATCAGGCGAGAAGGTGAATGTGGTGTTGAGCCATTTTCGCTTCAAAAGTGAGTAGTTTA
TGGGCACTAAGTTGTTGTTTTGCGTTCGGTTTAGGGCTACTTGACGGAGGCCGACCTGAG
ACGTGAGCTTCCTCCTGAACAGGTGCAGTACATTCTCTCGAAGCTGCATCCTCTGAGTGG
CGGGCCTGCAGGAGACACTGGCGCCCTCGACTTTGAGCACTACGTTCTCACCATATACGG
CACCAAGTAGAACCTGTTTTCCCCACTTCTCTCCCTTTCACGTTTAATCCCAATTGCTGC
CAATCTCTCCCACCGACACCCATCGACCAATCACTTTCTCACAATTATCACCATCCCCTC
GCTCGTCTTGATTAGTATCCCCTCTTTTGGAAATCACACTCAACTAGCAGCCATTCCATT
TTTTACGCACTGTTTTTAAAATTTCCGTGTGGAAGTGGAATATGTGTTCAAGTGTAACCG
ACTTGTACGGTTGAATCGCCTTTCTTCTCCCTCTTCCGCTCTGATGTCTTCCTGTTTCTC
TTCAAGCACCAGGTATTCCATGCCTTCATATGCCTGATCGCTCTCCATCTCATCTACTGC
CCTACTGACTGAATGCGCCATGGTTGTTTAAACTGATGGTTTTTCTCTTAATTAATAGAT
TGTAAACCCTCTTTGGTCTTTCTACAAGTGGCTCCTATTTAGTAGAGAAAAGCTATGCTT
AGTGGGGTTGTGTGCGCTACTGCTACGCTTGCCTGCGCTTTCCATGTTCTGCTCTAAGGT
GCGCATGAGTTTGTCTGTGCTACCATGACTTTAGCCGCGCAACTGGTTCTGACTATGATC
GCAATTTGATTTTGGGGGCTCGAACTTGGGGGGTGTCGGTTTGATTTACGAAGCGGGTTG
TGTACTCACTGATCATTCTCACCTAATTTTACCCGTCCTTCATGATTGTCATGTAATATT
GCTACGTGGTTTGTA                                             

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

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