WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
INSDC Sequence ID
About this gene

This gene has 1 transcript (splice variant), 181 orthologues and 22 paralogues.

Gene Type

Protein coding

Annotation Method

Gene models produced by University of Edinburgh, as described by Besnard et al. (2017).

Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • Flags
Transcript IDbpProteinBiotype
OTIPU.nOt.2.0.1.t0005244941497aa
 
Protein coding
Exons
  • OTIPU.nOt.2.0.1.g00052 exons
  • All exons in this region
Variants
  • loading
>scaffold:Oscheius_tipulae_assembly_v2:nOt.2.0.scaf00001:230602:239182:1
ACACAAGCTGATGCTTGACGTAAGTTGTGTTTTCCAGCTTACAAAGGAAGATTTTTCAGA
ACATGAGTGATAACTCGTCCGAATCCAAGCGGAAGATAAACACGGCTGCTGAGGAGAAGT
TTGGAGGCAATGTTGATGTTGTTTGTTCCCGCGGTCACTTTTCATATGTCTTCTCCTCCA
ATCTATACTGCGAAGCCACCAAAGGCCTTACGACTTGCATTGCCTTCCGTCAAGCTGCCT
AGCTCAAGTAGCAAAACAGCTCATTGTACAAATGTCCCTAATAAATTTTTGTTCCCATGC
ATTGCCAAAGGAGTTTACTCTATCTTCTACGTTTGAAACACTTTTCAGGCCTTATTAGGT
GGTCACGATAAGCATATTCTCTTGTGATCCGGGAGCACTTTTCCAAAACTGTTTTTGCGA
TATTTTGCTGAACAGGGGCTGTGGGAGCTTTGCCATCTGCATTGTGTGGTGTGCATTATC
CGTGAATGGGATTCGCCAGAAGCAGGCGGTATGCATTGCTGAAGAGGTCAGCCAGCCCCT
TTCTGTCTGCTCTTCCCTATTGTCTCAACCTGTTCTCTTGTTAGTTGGTTAGCTTTTAGC
ATGATGCTGATCTGGCTCTTTCTTCCGGGTTCCTTTGCCTATGGAAATGAACAAGCTTGG
TACTCGTCCTCATCCAAGTCCGTTCTGTCCCATTCAGATCCAGCAATCTTTGCAGCCAAA
ACTGCCATTGATCTTTGCACAGTGAGTTGTTTCTGAGTTCTTTAGTTAACAGCAAACTTT
TTCAGTTGCCACCAGACCTTGGAGGATGTACGAAGGAACTGGTGCGATACTACTATGATC
CAGTCGCTGATGATTGCAAGCGTTTCCTTTTCACGTATGATTGACTGTTCGTAGCAAGTG
CGAAAACTGAAATTTTAGGGGTTGTGGAGGAAATTCCAATCGCTTCATGCGCCGAACTCA
TTGTCGGAGTAGATGTGTCACAAATAAGTTAAAATTGCTGTCTCTTCATGAACCATCTTA
CGATGGAAAGATCGGAGTCGACCACAGGGTTAGTTAATTATATGAGTGTATATGTTGATG
TACATTTCAAAAGGCATTTTGACCGACTGCACGAGTCTAACAGCGAGAGAATGACTTTAG
CTTCCAAAGTTAATATTTGCACCTTAGGAGTGGGACTGCAGTAAAGGCTTTTTTTGCAAT
TCAAGTTTGTTTTTAGGATATTAAACATCGTAGAACTTTGACCACAACTCCTCCGACAGC
CACTACTACAACTACCACAACCGAACCATCCACTCGCGGTTTTCCCGTTACACCAGTCTT
GAAATCCATACCGAAAGTTCCCGTAAGGCAGTTAAGAATTTCACTATTCTTTTCCTCAGA
TATCCTCGACGATCACCCAATGTCCACATTGCGATCCTCTTTTTGGAGTTTGCGTGAATG
GCGAATGTGGCTGCATAGCCGGCTTCAAAAAACTCGGCCGGATCTGTATCGGTATGTATG
CGCCCCCTCTTCTAACGGCTAGACCCATTACGCATGCATGCGCATCTTTTTCAATTCATA
GCTCTTCCAAGCAGGATGAAAAGACTTCCGTTCCTCTTCTTGCACTCATAACTAATCATA
TCTGTGGTAGTCGTTCCGAGAAGACTGATTCCAGATATCAACGAATGTGATCAAGAACCG
TCTGTTTGTCCTACAAACTCAAGATGTACAAATACCATGGGAGCCTACCGATGTGACTGC
GACGCAGGCTACACAGAAAATGGAGAATGCAAGATAGAAGAAGGTAAAAACCGGTGAAGA
ACATTTATTAGTTTTTAGGAGCCTGTACCGATGAGTTTGACATTCTGCTCACGGAAGAAG
ATTGCAACAACGGCGAACAACTGCTCAGGTATCGTTTGTTATTGAAAGTAACAGCTATCA
AACTCAGATACTACTTCGACCGCGAGACAGCCTCATGCCGAAAGTTCTTCTACGGAGGAT
GCAAGTCATCATCCAGAAACATCTTCAACGACATACAGGTAAAATCTGTTATCTGCTTTG
AAATCAGTTCATTAGACCTGCAACACTCTCTGTATGAACCAGGATATCCAGCCACGAGAT
CCAGAACCAACGATCCCAGTCAAACTTAAAAATGATTTCGAACCACCAATGGCTCAATTA
TCTCACCAAGAAAAAGTCGAAGAAGCTGTAAAAGTTGTCAAGATCATGCATCACATCAAC
CCTAACGAAAGTGAGTTAAAACAAAAGTCTAAAGAGTATTGCTTTAGATCCCTGCTCCCA
TCCCTTTGACGAAGATCTGCGCGAAGAATGTGTTCTTGCTCATTGGGAGGAAAGATTTTT
CTGGAATCCAATTGTTCGAGAATGCGAACCGTTCTGGTACGACGCCACCTGTCCTCCTAA
GCGAACAGCCGGAAAGAACTTCTTTGAATCACTTTCCAACTGCCAGACGAAGTGTAGAGA
GGAACTTTCTAGCAGTCAGGAGGAGGCAATCGTTTTTAAAGTTAGTTACTTTATACCACT
TGGAATCCAAACTAGGCGCCGAGGACTACTCTAAAAATGGAATCGACGACACTGGGTGAA
GCATATAAGCATGCAATCCCTACTACAGGTTGGATTTTTTTAATTGTATATAGTACGTTT
TTAGTTCAACCGACTTCTGTTATAGTCAAGTCACAAACTTCTGCTCCAATTCAAGAAGTT
GGAAATTTCGAGGCCAAAACAGCCGTGACACGGTTCGATAAGGAAAAGTTTATGGTAGAA
TATCGCAGGAAGTTGAATGCTCTCCCTGACAACTATTCCAAGAAGTCATTTGACGTGAAC
AGTTTTGTAACTAAACGACCGCCTTTCACCTTGTTTCCAAAAGAAACTCTTCGAAGCCAA
GAGAACAGGCTTGACACGACTCTTTTCAAGGAAGTGACACCTGTTCCGACTACAATGCTT
CATATACCTGGAAATGTGAAAGATTTACTGGACCTGTCTCAGTTTGTGACTAAACGACCA
CCATTCACTCTCAATCCACCAATCTTTGGGGAACTGATCGACACTAGCCAGAAGTTTGAA
AAAGAAGAAACTACACGTTCAATGAGCCCGACGACGACTCACAATCCTCTTGACCTCTCC
AAATTCGTCACAAAACGTCCTCCATTCATCATATTCGTTACGGAAGGCCCGAGAAGTCAG
ACGAGTCCAACAACTGTTCATATGAGCCCTGTAGATGCCAAGTCTCTTCTTACGACTCCC
GTTCCATTGGATTTGTCTACGTTTGTCACAAAGAGACCTCCGTTCACACTTGTTCCCGAA
CTGTTCAAAGAAGAGATAAAAACGACGATGAGACAATCTCAATCTTTCGAGAACATTTAC
GACAAAACAGAGCTGGACCGTCATCGGTATGACATCTACTCATCCGAGAAACAAGACGAG
AACAGCATCGTTCATATCAATGTACCATCGACAAGAATGACACTTCTCCCAAAGCACAAA
CTGACCACTGAGAAAGAGCAGGTACGGTATTTGTACATTTTTAGAGACTACTATGTTTAG
ATTGCCAGTTTCTTGGATAAGATGAAAACACCCATTGATCTGTGTGAAGAACCTCTTCAT
CCTTCTTTGGAGGAAGACTGCAGCGGAGACGATTGGGTCTGATGTATAAAACTTGTACAC
AGTGATGGGTTAAGGTCTTGAGATGGTACTTCAGCTCAGATCGTGGATCTTGTAAAACGT
TCTGGTATGGCGGCTGTGAAACAGAAGCCAGAAATTTCTTCAAATCCAAAGAGGTATAAT
TCCACTTTTACATAGAAAAGACTATACAGCTGTGCAAAATAGCTTGCTCCCACAAGATAC
CTCCAAGTGACGGCGGATTCAATCCAAAATACGTCGTCCAAGCAGATACAACCACGACAA
CCACAACTCAGAGACCGACTACTACCGAAATGCCAGCCATTCAACGAAGTTTTATAGGTA
TGACTACCAGTATTTCTAAACCATCAGGTTTAGATATTAAAACTCGCGGTGGAGAAGTGT
TTGTACCAGTCAAGAGCGGAGAAATAGACGAAGTCAAAGATAAAAGACTTCGTTATATCA
CACTGCCGCCAACGACAACAATGACTTCTCCGATTATGACAAGTAGGCTTTGACATTACA
ATAAAATCCTAGTTTTAGCCACCGTGAAAATGGAAGGCGATCCTTGTGACGATGGCTACG
ACGAGCAGTGGGATTTAGACTGTTCTGGAGACAATTGGGAAGTGAAGGCGTACTACGACA
AAAAGTCTAACAGCTGCAAAAGGTAATCTTTCATTAATTTCTTTTCACATTCGTGCTCAG
ATTCTGGTGGGGTGGCTGTTCTACACCGAATCGGAATATATGGAAAGACAAACAAGTAGG
TGGCCGCACGACAGTATGAATATATGTATTAGGTTTGTCTGGATGTCTGCGGTCACAAAC
TGAACGCCGAAGAACTGCATCAGCCGACAGAGCCATCTGCAGCAGAATACGGTACAGCTG
AGCCTCCGTCCAACATGGTCGACGTTTTTGAGCTCCCCACTGCTAGTGCCCTGGTCGGGG
ATAGGTCACTAACAGACCCAGTTCCACAAAAATCCACTAGTAGAAAGTCCCGTAGAAATA
GACAAAAACTGCATTTGAAATGGAATGTGGTTCAGACAGATTATAAGATTGAAAGAGATA
ACAAAGTATGGGATGTTAAAAACGATGCTCCAGTTTCATTGAGCGAAGATGAGCGACCAG
CCTATGCCACGAAGGAACATTTTGAGGCCGACCTCCAGAGAAAGTTGGCTACCGAGAAGA
GAGTGTACGAGGGAAGAGCTGACCTCGGGTATAGCTCCGCCGGTCATCCTGTAACCATTG
CCTGTATGTTTATTGTTATGCTTCGCTTTACTGCTTGATGAACGAGTTTGCCACCCACAA
CTTGAACATCCGAGGGGATCTGCTAATGTACTAGCTCAACTGTTTTTGTACGCAATTAAT
AAAGATTCCTTACCCAAAACATGCAATTAGCCGATCCCCTCCGCTTTGCCTATAGCTGGA
GTGGGATCGTGCAATTCAGAACTTTCTAGCGGAATGTCTTGAGCCGTTTGATGTCACTTT
GTCCAAATCGTGCAGTAATGGAAGTTTCTGGACTAATAGGTGACAGAAACAGTGAACAAC
AGAATCCTGGTGTAGATATTTCTTTGATCCGGATATTCGGGCTTGTCGAATGTTTTGGAA
CGATGGATGCGCTTCTTATAGCGGCAATAACTTTCCCGACATGGAAACCTGCCAATGGAA
ATGCGAAGGCAGACATCCAGAACCGGAACGAGCAAGTAGGAGACATACTAAACTAATAAG
GGAATGGACTATTTAGAAGCTTGTTTGCAGCCATTTGACTCTATTTACTTGGATGATTGT
AGACATGGCGAGTATGGAAACAGATTCTATTTTGATGACGGCAGGTAATAGTTTTGATTG
AGTAAAAACGTTTTTAGAAAACGTTGCACCGCATTTCATTGGGGTGGATGCCGTTCAGAA
AGTACGAACTTCTTCAACGATCTTGGAGATTGTCAAGAGCTTTGCGAAACGGCACCGCGA
CATTTGACGCGTAAGAATACTTTGAATAATTGATCCCTATGTTTTTTGAATCATGCATCG
AGCCGTTTGACGAAGCTTACAAGGATTCCTGCTCCGCAGATGGTCGATATTTACAGTACT
ACTACTTTGATCACGCTAGTCACACCTGTAAAATGTTCTGGTACAATCCTGTTTATATTT
TTTCTCAAATTTCCAGGTACGGCAACTGCAAAGGAGAAGCACAGAATATCTACCCGACTC
TGGAAACTTGTCAATGGGTATGTGAACGACATCGAGAAGAACGATCACCGTCATACTGTT
TGGATCAGTTCAACAGCAAGTACACCGAATCTTGCGGGGAAGGAAGATGGATAGAAAAAT
GGTACTTCGATGTAAGTAACTCAGGTCATGTTTGTAATCTCATCCTAGCACAATATCGGA
GATTGTATTTCCTTCTGGTGGGATGGCTGTGTCTCCACTTCCCAGAACATTTTTTCCGAT
GAGAAAACCTGCAAGCTGCACTGCTCTAGCCCGGGTTTGCTTTCAATACATAACTTGTTC
ATAAATCTTCAGGTCACATTGTTGAATCGAGGCAGCCAGAACCAGACACAAAGTTTCGGT
GCTTAGAACCCATGGAAGTCGGAACATGCAGAAACGCGTAGCGTTCATAAGTTTTTACCA
TATGTTTAATTTCAGATATCCTGCTTTCTACTACGACCGTGACACCAAAATGTGTTCACC
GTTTGCCTATTCTGGTTGCGGAGGTAATGGAAACAGATTCATGACACTCTCACAATGTAA
AAACCTCTGCTACGTTTTCAATGACATGCCTGGTAAAAAGACACTCGGGATCTTCATCTT
TTTAGATTCTGAAATGGATTGTCATCTTCCTTTACACATTGGTTTTGGCCAAAGTGACAA
CCAGTGTTTGGAAACGGCAGGCTATAGATACTACTTCGATAGAGATTATGGTATGGGAAA
TGATTAACGGTTACTCATATCAAAGCAGGTCGTTGTACACAATTTTGGTTTATGGGATGT
GGAGGAAATGCAAACAACTTTTATTCCCACGATGTTTGCATGAGAACATGTCGCGTTGAA
AGACGGAGACTAGAGAGGAAGCCACGAGCCAGTAGTACAGGTGGTGAAACATGAGTTCCG
ATGAGAGTTCACTTCAGCATGTTACAAGCCATCAGCAGTATCAACCAAATGCTCTTCAAA
AATCAGTAGATCTGTTCAACGATGGACTTACCATGCCATGAAATGCACCACTTTTAGCTA
CAGTGGCTGTGGTGGTAATGACAATAGGCAAGGTGTATGACAGAGTTATTACGATACTGT
TTCAGATTCTATACAGAAGACGACTGCAGAGATACATGTGCTAATCACAAACCGAGTGCT
GATGCTGGTAGGTAGCAGTTTTAGACATCTTTTCAATTCAGAGTTTAGCTGTTTGCTCCT
TCGAGCCAGATGTTGGTGCTTGTAACCAGCTACGATACAAATGGTTCTACAATCAGACTA
GAGGAACATGTGATCAGTTCCTTTACGGAGGCTGTGAAGGAAATGTAAACAGATTTGATA
CGTTTGAAGACTGTCAGAAAAAGTGCGAAGTTTCTGGATTAGGTAGGCTGACTTCATTTA
TCAAAGCAGGCTGTAGATCCTTGCATGGAGCCTCTGGATCGTGGTAACTGGTGTGAAGCC
ATGTCGAATCGGTATTACTTCAATAGAAAGTCGAAGCAATGCAGAGGATTTCATTATACA
GGATGTGGAAAAAGTGGAAACAACTTTTTGAGTCAGGAGGAGTGTCACAACAAGTGCGAG
TTGCGCTATCCGAAAAAGAGAGCAACGCCACAACCGAAACTGTCTTCTAAGAAGAAACTA
CCTCTTAAGACTGGATGTAACTTACTTCTTATTCTAAGACTATAATTCTTTCAGATTCCG
GAGCCAAGCCTCCTATCAAAACTGCTATGATCCGACATATTGAGTTGAATGGATCCAACA
AAACTTACTACAAATCGGAACCCGAATGGATCGATTATTCTCTCTGTTTAGGATACAGGT
TGAGAGTTTAAATCTAACAAAAAGTTACGTTTCAGATACAATGTTTCGGGGCGAGATACC
AAACTGGAAGTTCATCTCTGTGCTCACAATGGAGACACGGGTTGTTACAGTGAAGTGTGT
TTCGTTTAGCAGTGTGACAGGTTGTTTCCTAGGTGTTTCAAGCTACAGAAGGCGAAGAAT
ATTGTCATGTCCTGCGTCCTTTCATCAGAGGCACACAAATGTACACGTGGTACTTTGCCT
TGAACTTGAAACATCCTGCATTTCTAGGCGAGAAAAATTCTACCTAATAAAATCAAATGA
TTTATAGGCGCTGGGCGTGTACAACAAGACTATGAAACGACTGCTGCCATTCTTCAATTG
AAAGCGAACCATTGTCACGAAATTTGTTGAAATTAGCTTGATTTAAAATTTTTTAATAAG
CTTGTGGAGCTTTTGTTGTCATCTCTTGTTCCCAGTTCTGTCCATCAAATGTACTGAATT
CTATCTTTTCTACTGTCGGCGAGTCAATGCAGTGTGGCATGATACCTTTAAATAAAAATT
GAAAATAATGGGGTAAAGAAACATACCAACATCTCCGGGGTTCGATCTTGGGTGGTAGAA
GCTCTGCACACCACATTTCTTGCAGAACATGTGCTTCGCGACTCCTGTGTTGAAAGTATA
CGTTGTCAACATGTCTTCTCCCTCAAGAAGCGTGAATCGGGTCTTGGACACAATAAAGTG
ATGGTTCTGCTTCTTGTAACATATTGAGCAGCTGAAAAAACGGTTATTGTAAATATACAG
TGAAGAAACTCACTTGCACTTGATGCATTGTATAATTTTTGGTCCGAAGACCTTCCACTT
AATAGCTCCGCAATGGCAGGAACCGAAATGCTCCACCTCAGACATGTGAGAGAACGAAAA
CAAGACCTTTGGACAACACAGACGATTAATAAGAGAGACTGGAAGGCTGACAATAAATTT
C                                                           

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

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