WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
e.g. O. volvulus, PRJNA60051, WBGene00262434, Bma-eat-4, eat-4 or metallopeptidase

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Gene: SRAE_2000002300 WBGene00260212

Description

4-hydroxybenzoate polyprenyltransferase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A090L6H4]

Location

Scaffold SRAE_chr2: 65,588-67,127 reverse strand.

INSDC Sequence ID

LN609529.1

About this gene

This gene has 1 transcript (splice variant), 244 orthologues and 1 paralogue.

Gene Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcripts

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Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
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Transcript IDbpProteinBiotypeUniProt
SRAE_2000002300.1960319aa
 
Protein coding
A0A090L6H4

Marked-up sequence

Download sequenceBLAST this sequence
Exons
  • SRAE_2000002300 exons
  • All exons in this region
Variants
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▼▲
>scaffold:S_ratti_ED321_v5_0_4:SRAE_chr2:64988:67727:-1
GGAAGAAATTGTAGATTATGTCCAGATGGTCCACCAGGACCAACAGGTTCATCAGGATCA
GATGGACCACCAGGTGAACCAGGACAAAATGGAATACCAGGTAGACTTGGAGAAATAGGA
TTCCCAGGAACACCAGGTCATCAAGGTATTGGAGGTGAACCAGGAACTAATGGAAAAATG
GGTCCACCAGGAGATAAAGGTGCTGATGGTGATCATGGAGGAAAAGGAGAACCTGGACAA
TCAGGACCTCCTGGTCCACCAGGAAGTAAAGGATTTCCAGGACAACAAGGAATGGATGGA
AGTCCAGGATTTCAAGGATCACCAGGAAAAAGTGGTGAAACTGGTCCAGTTGGTCCTCAA
GGTCCACCTGGTTATCCTGGTGCACCTGGTGGTTCAGGAAAAGTTGGTGAAGATGCATCA
TATTGTCCTTGTCCACCACGTTCAAAGAAAAAAGTTGTTATTTAATTGATATTATATATT
TTAATACTTAAAATAAAATTAAAATTGGTATACATATTACAAATTTTTTCGTGTTAGAAA
TAAATATCTATTTTTCTTATAAAACATTAAATATATAAATTATTCATGATGTCTTATTAT
ATGATATCTCGGGGTATATTATCAAAAAAATGTAATATTAATTTATGCAAATATTTTTCA
TCAAATATTGTATCAAAAAAATTTTCTGCTAGTGAATTAATAAAAAAATCTCCTAAATCA
ATTCAACCATATTTATATTTAATGAGAATTGATAAACCAATAGGTAAATAAAAATTTTCT
TTTTTTTTTTTTTAATATTATTATAATTATTAATATAGGAACATGGTTATTATATTGGCC
TTGTACATGGTCTATTGCTTTAGCAACTCCACCTGGTGAATTACCATCTTTATATATGTT
AGGATTATTTGGAGTTGGTTCTATACTCATGAGAAGTGCAGGTTGTATTATAAATGATTT
ATGGGATAAAGATTTTGATAAACGTGTTGAAAGAACAAAAAATCGACCACTTGCATCTGG
TAAATTAACAGATAAACAAGCAATAGGATTATTAGGTGGATTATTAACAACTTCTTTAGG
AATATTATTACAATTAAATTGGTTGGCTGTTGGTGTTGGTGCCTCATCAATGGTATTAGT
TATTGGGTATCCTTTAGCTAAACGTTATACTTATTGGCCACAATTAATTCTTGGTAAGTT
TATGTATATTTGTCCTTTTAAAATACTTTAAATAACAACTTTTTATTCGCTCTGACTTTT
ATTATAACATATACTAATTTTGTAATAATCTCTAGGAGCTACATTAAATTGGGGCGTCTT
GATATCAGGATGCCATTTATGTTTTGCCTCAGCAGTATCTTCTAGTTATATACTTCCGTT
ATATATTTCAACAATCTGTTATACAATGGTATATGATACTATTTATAGTCATCAGGTATA
AAAAAAATTTTTATCTATAAAAATATTTGCTCGTGTTAACAAAACATTCCTTATGTTATA
TTATTGTATTGTCTATAATTAATCCAATTAAGTTATGTGGTTGTTGATTTTCAGGTTTAA
CATTTAACTATGGTACTATCTTAGGATATATATCTGTGGCAAATGAAATACCACTTTCTA
TATTAATTCCTATATATGTTGCTGCAATTAACTGGACACTTGTATATGATACAGTATACG
CACATCAGGTCTGTTATTGTAGTTATTTTTTTATTTAAGCATGATTAGCACGAGCTAGGA
TAATTATATAATAAAATATTTATTATTTTTTTTTATAAATTTTTTTTATTGATATTTTAG
GATAAAAAAGATGATATTATGATTGGAGTTAAATCAACAGCATTAAAATTTGGTGATAAA
ACAAAAAAATGGTTAAGCGGATTTTCAACAATTACAATGTCTGGATTATTTTTAGCTGGA
TATATGGCTGATCAGACATGGCCTTATTATTTAGCAATACTTGCTACATCAGGACATTTA
GCATGGCAAATAAAAACTGTTGATTTAAATAATAGTAATGATTGTTGGGAAAAATTTAAA
TCAAATCATTATCTGGGAGCTTTATTGTTCGCGGGTATCGTTGCAGGAAATTTATTAAAA
AATAATTAATAATATGAATTTATTTTTTAATTTTAAGTAGAAAAATATAATAAAAAAAAT
TAGTCAGTTCTAATACGTCCAGGAGAGTAGTTTTTGTCAATTTCAGCATTTTGTAAAAAT
ATATGAAGTGATCGTTCGTTTTGTGCTAAAGGGTGTCCAGTAACTTTATTCAAAAATTGT
TCTAATGCAGCTCTCCTCCTTTCAATAAATGATTCTTCAAAAATTCCATCATCATTACGA
AAAGGAAGTAAACGTTTAATTGATTTTCCAGGTAATTGTGGAACAAGTATTTTACTATCT
CTTTCAAGTTCATTTCGAAGCCATTCAAAATCAGAGTAACGACGACGTACAGAAGATTCT
TTTTGCTTAAAAACAGGAAGATTAGTTCTTAATCTAACTTCATAATCTGTATATCTATTC
TTTCCAACTCCATGTGTTATTGGATTAACTACTTCAACTTCAAGGAAATTGGCAGGTGGG
GCATATGCTTCATCAAGTGTTTGTCTTTTACAAATAAGTCTTTGAGTTGCTGCTGCAGAC
ATTTTTAAAACTATAATTATAATAAATGTTAATCAATAATAAATTTTCGTAGAAGTTATA
TTTAACACGAGATCAATTTACTAAAAATCGATGAATATTA

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

This view and the transcript based sequence views are configurable by clicking on the "Configure this page" link in the left hand menu

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