WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
Description

Arginyl-tRNA--protein transferase 1 [Source:UniProtKB/TrEMBL;Acc:A0A0V1K245]

Location
INSDC Sequence ID
About this gene

This gene has 1 transcript (splice variant) and 318 orthologues.

Gene Type

Protein coding

Annotation Method

Gene models produced by the Gasser laboratory at the University of Melbourne, as described by Korhonen et al (2016)

Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
Transcript IDbpProteinBiotypeUniProt
T4A_5137.12160488aa
 
Protein coding
A0A0V1K245
Exons
  • ATE1 exons
  • All exons in this region
Variants
  • loading
>scaffold:T4_ISS13_r1.0:scaffold1s:41086:45034:1
TATGCTGAAAGCTTTAGAAGAAATATTCATAATACACTGCAAATAAAAAATAACAAAAGT
AATGATGAAAAAAATGTGTTGCAGTAATATCAGCTGATAAAAAGGAAAACATACACACCT
ATTTAATGGTCGTAAAACAACTGGCACATCCATCACATATAACTAAGCTGATAAAACAGA
AAATAAAGAGCTAATAATGCAGTGCTACTTTTACACAAAGCAAAAACTCGAATGCTACAG
TATGAATAAAGCAAGCTTTATTATTTAATTATCGTACCTGTTGTAGAAATTTTTTTACAA
AAATTAGTATTAATATTTATTTTAAAAAATTGTCACATTCTTTAAATATTTTTCATAATC
TTTAATAAAGTTTTATTATATATTTTGTGGGAATAGCTTAATATTTTTAAAGGCTTTTTT
TACAAATTGTAAAATTCTTTTTGAGATGAATTAAAGAAGTAAAACATTTGCAGTAAATCA
ATAATATGAAATTTATATTATTTAAAATATTAAATTTAAAAGGAAAATATTGAAATGTTG
TTCTAAAATTTAAGAAAAACAAATAATTCCTACTTGTCATATTTTACAGTAAAGTGGTTT
CTTTGTGCGACGTTTGGCAGCTCTAATTACACATGAAAAATGGATGGTAGAAGTGTTGTA
CAATATTTTGGTAAAAGTAAGAATTCTTCTTGTGATTACTGCTCGGTGCCTGGCTCTGGA
AAATGCTGCTACGGAATATGGGCTTATCAATTAAATGTTACCCATTACCAAAAAATGTTG
GACAAAGGATGGCGCCGTTCCGGTCATTACTGTTACAAACCTATTCACGAAGAAAGCTGC
TGCACTCTTCATACCATCAGATGCGATGCGTTAGAATTTCGGCCGTCAAGAAGCCAGAAA
AGAGTAATGAAACGTTTTGAGCGATTTTTACGTACTGGGGAATTTAAACAGCAGAAATTT
GATTCTTTTCAATATAAAGATCCATCGGAAGAATTTTTTACTGTTGAAAATGTGATAAAT
GATAAAACGCTTGACAAAAATGCAGAATGTTTTTTAAGGTTAACAGTGAGTGATTGCAAT
CCAACTTGCAATATTTTGGATGTCGGAAATATGCAGGTATGCACTTTACAGGTAGACAGA
GAACAAACGAACAGTTTTGAATCTGGATATAGTGAGAGAAAACAAAAGAAAGCGAAGTTC
AGACGTAGACAGAGAAAAATTTTGAAGTTAAAAGAGAAGGGGATTGATCCATCTACTTGG
ATTAAAAAGCAACCTCCAGTGAAAAATTTAGAAGATTACATCCGTTTTTCAGATGAAAGC
AAAACATTTAAGCATTGTTTTCATGTTAAAATGATTCGTTCATCTCCTGCATCGAGTGAT
TTTAATGATACATTTGAAGAAAGTTTTGAAGTTTTTAAAAAATACCAAATGGCTATTCAT
AATGATGGCATTCGTTCGTGGTCGGAACGCAAATACCGTGAATTTTTATGCGAGTCGCCG
TTAGTTGCGGAAAATTTTCCAAACGTAGCCAATGAACTTGGCTATGGCTCGTATCATTGT
CAGTATTGGTTGGATGGGAAAATAATTGCAGTTGGTGTTTTGGATATCTTGCCGAATTGT
ATTTCATCTAAATATTTTTATTATGATCCTTTTTACAAATTTTTATCGCTTGGAACCTTT
TCAGCTCTGAAAGAGATCGAACTGACTCGTCATTTGGCAAAAATAATTCCACAGCTGCAT
TTTTACTACATGGGTTATTATATTCATAATTGTCCCAAAATGCGATACAAGGGCAATTTT
CATCCTAGCTTTTTACTTTGTACTGAAACATGCAATTGGTTTCCAATTGAGACGTGTTTG
GGTATGTTGAACTTGGGAAATTGTTACAAATTTTCCTCTGCTAATGCTGGTGAAACGAAA
AGGCACAAGTTTCCTTCGAAAAATTTCATATTGACTTTGTGGCATAATTTAGAAAATAAT
TTAATTGCAACTGATTATAGCACATATTGTTTAACTCGTGGTCTTCAAAAAGACAGAGAA
GTTGAAGAATATGCTGCGTTACTTGGTGATATGGCTATTCAAAGCATGTTTTTATATCTT
GCTTGATTTGAAATTAATGAAATAGAATTAAATTTGTTTTAAAAATATGTTTTTCTCATA
AAATACATGGCTGTACATTGATCAGCTCAGCATTCATGTTTTTTAAGAATTTTTTGTTTT
GCGTTTTGTCATTTTATCCTTTTACTAAATTACACTGTACATAGTGAAAGTGAACAGTAT
ATAAATACATATTTGTGAATTTTAAGTTTGCTATGCCAATTAAAGATTTGAAAGGTCACC
AGTCTTTGTTAAAAGAAATTGATCATCTTAGAGGAAAAGTGGTTTTTGTGCTTTTTACTG
GTAGTAAAGACAGTTTTGGTAAAAGCTGGTGTCCAGATTGTGTTAAGGGTAAGTTAATGC
ATTGCTCACTTATTTAAGGCTGAATCACAATGGCTTTGAAAAATAATTATTACACTTGCA
TTATTGTATGCAGCAGAATTTTTTCTATTGACTCAACTTTTATTGTATAATTATTGCAGT
ACATTATATAGTGGTAAAAAAATTAAGAAACTTTTATGCCACTATAGTTTTTTAAGATGT
TATTCATATATAGTAATTAGGGATGCAGTAAGTGTTTAATGGTGCATTTTAATTTTAGCT
GATAAAATTATCGAAAAATATGCAGAAAAACTTGATCCTGATTCAGTTCTTATCCGTTGT
GATGTTGGTGATCGTGCTACGTAAATTAAAATTTACGCAAAATTTTACTGTTCATAAGAG
TCTATTGCGTAGGTGGAAAAATCCAGAGAATGAATTTCGTACGGACAAAACATTTCACAT
TACTGCCATTCCAACTCTGATGAAACTGGGAACAGTATGTTTTATTTTATCAGTTTTACA
AATTTAGGTAATAAATATGATGAATGTAATTTTTATTAATATTTTTTAAAATTTGCAATG
CATGCAGGGTATTGATATATGACATACTTGAGTGATGTAAGTTATTTCATGTAAAGTTAT
TAGCAATAGAATGAGCATATATATCTGAAAGTTTAAAATGTAGAAAAAATATTGAAGTAC
TGGTAATTTAATAGTTGCTAATTGTTTAATTTTTGTATATTTGACATATTTATTACTTTA
TTTACTTTGCAACATTTGCAGGAGAAACGACTTGTCGAAGAGCAGTGTTGTAGTGAAGAA
TTAATATCCATGTTATTTGAAGATTAAATTCAAATGTAAATAATCTTAACAAGATATTGC
TTTCTGTTATTTATTACATTTATACTATGCATATTGTGATTTATTTGCCACTAAACTGAA
AATGAGAAGAGAAAGTTGAAATGTAATAATTTGTTAAATAAATTTTGTTGAATATTTCTT
GTCCATTAATATTAGAAGAAACGGTTTGTTTATGAAATTATTTTTAAATGAATAATTATA
ATGATAATGAATTGATTTTATTTTCAAGTTAAATTTTTTTTGTTTCATTTTATCTGCATC
CTGAAAACTGTTAACATATGATGATGTTGTTGAAATTATGATTAGACAAAATATATTACA
AAAGTATATTTGTATTGTATTTTCTTTATTTACAGAAATTATTTTTTGATGATTTTAATA
AGTAATGAATTTTAACATTTATACCATCTTTGCACGAATATTTATTGTTGGACTCTGAGT
GTAATTTATTAAACATAAATAAACGATGTATGATACAAAAGAAATTTCAAATTTGCTTAA
AAGAAATGTATAGGTGAAATGAAATGAATAATTTGTTTTATTTCAATAAAAAAATAGTAA
TAAAGAATTTATTAGGCATAGTATATATATATATATATATATATATATATATATATATGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTA           

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

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