WormBase ParaSite HomeVersion: WBPS19 (WS291)-  Archive: WBPS18
Description

Pre-rRNA-processing protein pro-1 [Source:UniProtKB/TrEMBL;Acc:A0A0V1G6H4]

Location

scaffold1s: 704-2,567 forward strand.

INSDC Sequence ID
About this gene

This gene has 1 transcript (splice variant).

Gene Type

Protein coding

Annotation Method

Gene models produced by the Gasser laboratory at the University of Melbourne, as described by Korhonen et al (2016)

Show/hide columns (3 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
Transcript IDbpProteinBiotypeUniProt
T4D_13638.11323440aa
 
Protein coding
A0A0V1G6H4
Exons
  • pro-1 exons
  • All exons in this region
Variants
  • loading
>scaffold:T4_ISS470_r1.0:scaffold1s:104:3167:1
ACAGCTTCGAAAACTTCACCGAAGTTTGGATCATTTTGCCATGTTGAAAAACAAGAACAC
CAACAATAATTCTGGTCATAAAATGAAATTGATTTGAACTTTTATCTTTTTTATTTTTAA
ATAATATGTATACATTTTAATGTATATTTGTTTTAACAATTTTATGCAGATAATGAGAAA
AAAAACTTTTGACTATATTTATTTATTATGTTGGTACTGGTGGTTTTATTCTTCACTGCT
GCTCTGCTGCTGGTCGGATTTTGAGGAATGGTTTTTTTTTCTTTGTTTGTTTGTTTATTT
GTTTGTTTGTTGGTTTGTTTTATTTTTTAAGCATCATTCTTTGATAAAAATAAATAATAA
AATTTTCATCTGTTCTACTATTGTTGTTATTGTTGTTGTTGTTGTTGTGTATGAATCTGT
TAATATTTTACAATTTATTATTTTTTTTTATTTTTGGTTTTTTTTTAAAAAATTAAACAA
TTTTTCAGTAATTAACAACGGATACAACTGGCTTGATTAATTTGCCCGAGGTAGGCCTGC
CTCTTTGCGATTGATGAAATTCAATTTTGTTTGTTTGATTGTTTTCAAATTTTTATGCAA
ATGTTTCAGCTTTTGCTCGTCTGCTCTTCGTCGACTAATGACGGAGTCGTTGCTGCTTAC
AACCCACGCAACGGTTCTACAGTATGGCTGTTGCGCGGCATAGATTTAATCGACAAACGA
CCAGAAAAAGCTTTGCTCGTGCACGGCAGTTGTGTCTTCATCTCTTTCAACAAAAAGCCT
GTTATGCAAGCTTACAACCTGAACAACAAAGTATTTATTTGTTTATTTGTGTTATTGTTT
TTTTTGGTTGTTGTGAAAAATAAACAACTATTTAAGGGAAAAGTGGGATTGCTTTCTTGT
CTCCAAGGACCGTTGACTGATTTTGCTATTTCTGTGGATGGAAGTTTATTTTTTGGAGCA
ATCGACAACAGTTTGTTTACCTGGCGGGTAGAATTGAATTGAATTTTAATACCGATTTAC
GTTGTTGTTTACGGTATATTATTTTTATTTTTATTTTTTTTCAAGACAACAGACGGCATG
GCATTGACGTGCATTGAAGCGCATCACAGTCCCATAGTGAAAGTATCCGCTTTGCAAGAC
AACAGTTACGTCATCACCGCTAGTCAAGATGGTTTCATCAACGTGTGGAATATTGGCCTG
TGTGGTTCTTTTTGTTTGAAATTGAATTTAAAAAAAAATTTAATTAGCATTTTCTTTTCT
TCTCAGACTTGTCACACCGATGTCTCTTTCCAATGCAACGCCACTGCCGATCATCCGTTG
GACTGCCCACTATTTGCCAATAACTGATCTGCAAGTTGGAAACGGTGGAATTACCAGCCG
AGTTTACAGTACATCATTGGATCGAACACTGACTGTAGAATAGATAAATTTAATTATTTA
AATTAATTATACTGACTCATTCCAACTATCTTAGGTGCACAGTTTATTCACTGGAAAGTT
GGAAATGGAAATTCATTTCCGTTCGCCACTGACCGCATGTACGACAGATCTATCCGACAG
TAAAGTGTTTGTTGGATCAAATGTGGGTGAAATTTGGCTACTTTGTTTGTTTGCCGGAGT
AATTTAGTCCGTTTTTATTTCATCTTTGTTAAAATTATTCAAAAATATATTTTCTTGAAT
AGCCTTTAAACAAAACGGTTAATTTTGATCTGTTGGATGATAAATATAAATTGGAATTTA
TCGGTCACAAGTATGTTATTATTATGTTATGTGTATGATCATTTGTGATTCAACAACTTG
CGCATGCTGCTAGATGTGAGGTGACCAATTTGACCACTGATATCAGCGGTACACAGCTAG
CGTCGGCAGCTTTCGATCTTTCAATCCGTCTTTGGGATATTTCCAATGGTCAGTGTATGC
GAATCATCACTTTGGAATGTGAGTTTCATTTAATCACTCTTGAGCGTCGAATGTAATGTT
TTTTTAAATATTAATTTAAGCAACGCCCACTTTTATGAGCTTCGTTCCAAACGTTCCACT
GTTCACCAGAGAAATTGAACACGACGTCAGTGGACAAGTGATGCTTGTGCAGAAATTTGA
CAGAAATGTCAATCGCGATGCCAATAACAGTGTGATCCCGTTACGTCGACAAGCACATTT
TGGTTTGGCAGCTGAGGATTTCGGTATCGATGATGAAGAGCAATTTTTACAGGTAAATTC
AATGAATAGTTTATTTATCGATGTTAATCAATATTAATTTGATTAATTAATTAATTAGTA
ATTTTTGATTCAGCATGAACAACAACAGCAAGAAATAGATAAGCTGAAATACCAATTGGA
CATGTACATGAAAATTAATAAATCAATGCGAAAAATGGTCTCGGGTAAGCTTTTCCACAC
TGGAGATGATGACAATGACGATGGAAATGATGTTGGACAAAATTCAAGAGAATCACACTG
CTGAAATTTGTCTTTTTTTCCTTTTGGTAAAAAAATTATAACAAGAAAATCGTTCCAATT
GAATATGCATGCTTGATATGGTCATTTTCAACGCTTTCTCTTCGGAACTTAGACAGACCA
GTCCATACCAGAAAAAGAATCCAATCGATAAAGTTAATAAAAATCGAAATATAATTATCT
GAAATAAAGAAATGAAAAAAGGCATTATTATTGTTATTATTATTGTTGTTGTTGTTATTA
TTTTCTTTTGAATAAATAATCTGAAGCATTTTATTGTTGTTTTTACCGGTAAAGTGATGC
TTGGCCAGTGCAATTCCACGTCCACTGTCCATATGTACAATGCAAGCGAGAAGAGTAACC
TGAAGAGGAAGTATGCTTTATTCTGTTTTACCTTCTGCAAGCCACTTTCGACCACAGGTA
GAATGTAGCGTAACTGATTGGCAAAATTGATCAAATGTTCGTAAACCTCTCGGCTATTTG
ACTCTTCTATTCCTGTAGATTAGCATAATCAAAGTTTGTTTATATTTTAAAAATATACAA
TAAGCAAAACATAAAGAATTTTTTTAAAAAAAATACTTTCTCCATTTCTTGCAATATTAA
GGGA                                                        

Sequence markup

WormBase ParaSite has a number of sequence markup pages on the site. You can view the exon/intron structure of individual transcripts by selecting the transcript name in the table above, then clicking Exons in the left hand menu. Alternatively you can see the sequence of the transcript along with its protein translation and variation features by selecting the transcript followed by Sequence > cDNA.

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